| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1056 |
|---|
| Symbol | |
|---|
| ID | 4625984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 1329738 |
|---|
| End bp | 1330925 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639796272 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_942494 |
|---|
| Protein GI | 119944814 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAC TAAATCCTTA CTTTGGTCAA TTTGGTGGTA TGTTTGTACC CCAAATTCTG
GTCCCCGCAT TAAAACAGTT AGAAGCTGAA TTTGTAAGAG CGCAAACAGA TCCTGAATTT
TTAGCAGAGT TATCTGAATT ATTAACCGAA TATGCAGGTC GCCCGACGCC CTTAACATTA
TGTCGCAACC TGACTAAAGG TAAAAAAACC AAACTTTACC TTAAACGCGA AGATCTGCTC
CACGGAGGTG CACATAAAAC CAACCAAGTT TTAGGGCAGG CATTACTCGC TAAACGCATG
GGTAAAAAAG AAATTATTGC AGAAACGGGT GCCGGCCAAC ACGGTGTTGC AGCGGCATTA
GCTTGTGCAT TACTTGGACT TAAATGTCGT GTTTATATGG GTGCTGTGGA TTGTGAACGT
CAAAAACCCA ATGTCTTCCG TATGCGTTTA ATGGGCGCGG AAGTGATTCC CGTTCATTCC
GGTTCATCAA CATTAAAAGA TGCCTGTAAT GAAGCATTGC GTGATTGGGC TGGCAGTTAT
GATACTGCGC ACTATTTATT AGGGACAGTG GCCGGCCCAC ACCCTTTTCC AACGATTGTA
CGTGAATTCC AGAAAATAAT TGGTGAAGAA GCGAAGCAGC AGGTATTAAA AAAAGAAGGT
GTGCTACCTG ATAAAGTGAT TGCCTGTGTC GGCGGGGGCT CTAACGCCAT CGGTATATTC
AATGATTTTA TAGACGATCC AAGCGTTGAA CTGATTGGTG TTGAGCCAGG AGGACGCGGT
ATTGAAACCG GTAAACACGG TTGCCCTATC ACCTATGGTT CAAAAGGTAT CTTCTTTGGT
ATGCATTCCT TAATGATGCA GGATAAACAT GGTCAGGTTA AAGAGTCTTA TTCGATCTCT
GCCGGACTTG ATTTCCCGTC CGTTGGTCCG CAACATGCTC ACCTTGCAGA AACGGGACGC
GCCCAATATG TTTACGCTAC CGATGACGAA GCGCTAGATG CTTTCCATGA ACTCTCTTTA
AAAGAAGGTA TTATTCCGGC TCTTGAGTCC GCACACGCAT TAGCACATGC CTTAAAACTA
ATTAAACATG ATGATAAGGA GCAAATCATT ATTGTTAATT TATCCGGCCG TGGTGATAAA
GATATCTTTA CCGTCGCTGA AATTTTTGAA GAAAGAGGAA TTCTCTAA
|
|---|
| Protein sequence | MEKLNPYFGQ FGGMFVPQIL VPALKQLEAE FVRAQTDPEF LAELSELLTE YAGRPTPLTL
CRNLTKGKKT KLYLKREDLL HGGAHKTNQV LGQALLAKRM GKKEIIAETG AGQHGVAAAL
ACALLGLKCR VYMGAVDCER QKPNVFRMRL MGAEVIPVHS GSSTLKDACN EALRDWAGSY
DTAHYLLGTV AGPHPFPTIV REFQKIIGEE AKQQVLKKEG VLPDKVIACV GGGSNAIGIF
NDFIDDPSVE LIGVEPGGRG IETGKHGCPI TYGSKGIFFG MHSLMMQDKH GQVKESYSIS
AGLDFPSVGP QHAHLAETGR AQYVYATDDE ALDAFHELSL KEGIIPALES AHALAHALKL
IKHDDKEQII IVNLSGRGDK DIFTVAEIFE ERGIL
|
|---|
| |