Gene Ping_1011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1011 
Symbol 
ID4626264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1272359 
End bp1272979 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content38% 
IMG OID639796227 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_942449 
Protein GI119944769 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID[TIGR00948] L-lysine exporter 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.591739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAA TATTGTTAGC AAAAGGATTT GCCCTTGGGA TCAGCATGAT TCTTCCACTC 
GGAAGTCAAA ATGCAATGAT GCTAAATCAG GGAATTAACC GCAATTATCA TTTATTAACC
GCATTATTTT TTGCGTTGTC TGATATTTTA TTAATTACCT TTGGTGTAAT GGGTGGCAGC
TTTCTGTTAG CCAGTAATGA AATAATCTTT GATTTGTTAA CCTGGGGTGG CATTATTTTT
TTATGCAGTT ACGCTGCGAT GTCAGTCAAA GCTGCTTTTA GCCGAACAGT GGATAGTAGC
ACAAGCAGTT CGGCAAAAAA GTCGTTAAAA ATAGTTTTAA TCAGCAGTTT CTTAGTCACC
TTTTTAAACC CGCATGTGTA CATTGATATG CTTATGATTA TCGGCAGTGT TGGCGGGCAA
TATCAAGGCA GCAATAAAAT ATACTTTATG CTTGGGCTTA TGTCTGCATC GGTTTTTTGG
TTTTTCACCT TAGCAATCGG GGCTGCCAGG TTGTCGAAAC AACTGAGCAA ACCCCGTATC
AAAGGTGCCA TTGATATCAC TGTTGCGGTT ATTATGTTTT CAATTGCCTG GTCATTATTG
ACCACTTGGT TAGCAAAATA A
 
Protein sequence
MSLILLAKGF ALGISMILPL GSQNAMMLNQ GINRNYHLLT ALFFALSDIL LITFGVMGGS 
FLLASNEIIF DLLTWGGIIF LCSYAAMSVK AAFSRTVDSS TSSSAKKSLK IVLISSFLVT
FLNPHVYIDM LMIIGSVGGQ YQGSNKIYFM LGLMSASVFW FFTLAIGAAR LSKQLSKPRI
KGAIDITVAV IMFSIAWSLL TTWLAK