Gene Ping_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0968 
Symbol 
ID4626755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1215661 
End bp1216377 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content38% 
IMG OID639796185 
ProductDNA polymerase III subunit epsilon 
Protein accessionYP_942407 
Protein GI119944727 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.109117 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATT TCAATGACCA TGAGATTTTA AACTGGGCAG CCTTTCTGCA GTTAAAAGAG 
CAGCTCAGTA AAGATTCACG TTTGAAGAAT TTTTATAAGA CAGGAACCTA TCACGCTGAA
ACGCCATTAA GTGACATTGA TTTTGTCGCA CTGGATTTTG AAACGACAGG CTTAGATTCA
CAGCAAAACG GTATTATTAG CATTGGTCTG GTGCCCTTTA ATTTACAGCG TATTTTTTGC
CGAAAAGTAA AAGAATGGTA CATCAATCCA CAGGATAATT TACAAGAAAA CTCGATTATT
ATTCATGGTA TTACCCACTC GGATTTACAA GATGCACCTG ATATTCTGAG GATTTTGGAG
CAGCTTTTAG ATGAACTGGC CGGAAAAGTG GTGGTGGTGC ATTATCGTCG TATTGAGCGT
GATTTTCTTG ATCACACTTT ACGCATTTTG ATTGATGAAG GTATACTATT TCCAGTTATT
GATACCATGC AGATTGAGGC CAATTTGCAA CGGCGTAAAT CGCAGGGGTT GTTTAATTTC
TTTAACAAAA AACGACCAGA GTCAATTCGT CTTGCCGATA GTCGTGCTCG TTACAACTTA
CCCGTTTATC CGCCTCATGA TGCCTTAACT GATGCAATTG CTACTGCGGA ATTACTGCAG
GCTCAAATTA AATATCATTT TAGTCCTGAC ACTGCGATTA AAAAATTATG GTTATAA
 
Protein sequence
MNNFNDHEIL NWAAFLQLKE QLSKDSRLKN FYKTGTYHAE TPLSDIDFVA LDFETTGLDS 
QQNGIISIGL VPFNLQRIFC RKVKEWYINP QDNLQENSII IHGITHSDLQ DAPDILRILE
QLLDELAGKV VVVHYRRIER DFLDHTLRIL IDEGILFPVI DTMQIEANLQ RRKSQGLFNF
FNKKRPESIR LADSRARYNL PVYPPHDALT DAIATAELLQ AQIKYHFSPD TAIKKLWL