Gene Ping_0951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0951 
Symbol 
ID4626659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1188000 
End bp1188806 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content43% 
IMG OID639796165 
Productshort chain dehydrogenase 
Protein accessionYP_942391 
Protein GI119944711 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.333261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTA AAGATAAACG CGTGTTATTA ACGGGGGCAA CAGGCGGTAT TGGTCGCGCT 
CTTTCCCTGG CATTGGTTGA GGCTGGTTGC CACTTAATCT TAGTCGGCCG AGAACAGGCT
AAACTTGATC AACTCATTGA TGACTTGCCG CACAGCAGTA ATTATTTATC TATCGCAGCA
GATATCGGCT GCGCAGAAGG TATTAAAGCC GTTGATAAGG AGTGCCAGTT ATATATACAA
GAAGGCATCC CTATTGATAT CGTCATTAAC AATGCAGGCT GTAATACTTT TGATTATCTC
ACGCAACGGA CCTTAACCTC TATTGAGCAA GAGATTGCGG TTAATATCAG CGCGCCAATG
CAATTGACTA AACTCTCTCT GACCTGGTTA AGTTATCCGG GCATTATTTT AAATATTGGA
TCCACCTTTG CCGCTATCGG TTATCCGGGT TATGCCACTT ACTGCGCAAC AAAAGCGGCT
TTACATCGTT TTAGTGAAGC AATGCAACGC GAATTAAAGG ATACCGGGCG ACAAGTATTA
TTCGTCGCAC CACGTGCCAC GGACACCGAT TTAAATGATC AACGCGTGAC TGCGCTTAAT
AAAAAATTAG GTAACAGCAC CGATAGCCCC AAGGCCGTCG CCAAGCAGAT ATTAAAAACG
CTGCAAACAG AGCAAAAAGT GTGCTGGATT GGCTGGCCTG AAAAATTATT TGTACGAATT
AATCAACTAT TTCCAAGCTT AGTCGCTTCC TCTATCCACA AACAAAAAAA ACATCTGAAC
AAAAGTCTTT CTGACATTAA TGAATAA
 
Protein sequence
MKLKDKRVLL TGATGGIGRA LSLALVEAGC HLILVGREQA KLDQLIDDLP HSSNYLSIAA 
DIGCAEGIKA VDKECQLYIQ EGIPIDIVIN NAGCNTFDYL TQRTLTSIEQ EIAVNISAPM
QLTKLSLTWL SYPGIILNIG STFAAIGYPG YATYCATKAA LHRFSEAMQR ELKDTGRQVL
FVAPRATDTD LNDQRVTALN KKLGNSTDSP KAVAKQILKT LQTEQKVCWI GWPEKLFVRI
NQLFPSLVAS SIHKQKKHLN KSLSDINE