Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0951 |
Symbol | |
ID | 4626659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 1188000 |
End bp | 1188806 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639796165 |
Product | short chain dehydrogenase |
Protein accession | YP_942391 |
Protein GI | 119944711 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.333261 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTTA AAGATAAACG CGTGTTATTA ACGGGGGCAA CAGGCGGTAT TGGTCGCGCT CTTTCCCTGG CATTGGTTGA GGCTGGTTGC CACTTAATCT TAGTCGGCCG AGAACAGGCT AAACTTGATC AACTCATTGA TGACTTGCCG CACAGCAGTA ATTATTTATC TATCGCAGCA GATATCGGCT GCGCAGAAGG TATTAAAGCC GTTGATAAGG AGTGCCAGTT ATATATACAA GAAGGCATCC CTATTGATAT CGTCATTAAC AATGCAGGCT GTAATACTTT TGATTATCTC ACGCAACGGA CCTTAACCTC TATTGAGCAA GAGATTGCGG TTAATATCAG CGCGCCAATG CAATTGACTA AACTCTCTCT GACCTGGTTA AGTTATCCGG GCATTATTTT AAATATTGGA TCCACCTTTG CCGCTATCGG TTATCCGGGT TATGCCACTT ACTGCGCAAC AAAAGCGGCT TTACATCGTT TTAGTGAAGC AATGCAACGC GAATTAAAGG ATACCGGGCG ACAAGTATTA TTCGTCGCAC CACGTGCCAC GGACACCGAT TTAAATGATC AACGCGTGAC TGCGCTTAAT AAAAAATTAG GTAACAGCAC CGATAGCCCC AAGGCCGTCG CCAAGCAGAT ATTAAAAACG CTGCAAACAG AGCAAAAAGT GTGCTGGATT GGCTGGCCTG AAAAATTATT TGTACGAATT AATCAACTAT TTCCAAGCTT AGTCGCTTCC TCTATCCACA AACAAAAAAA ACATCTGAAC AAAAGTCTTT CTGACATTAA TGAATAA
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Protein sequence | MKLKDKRVLL TGATGGIGRA LSLALVEAGC HLILVGREQA KLDQLIDDLP HSSNYLSIAA DIGCAEGIKA VDKECQLYIQ EGIPIDIVIN NAGCNTFDYL TQRTLTSIEQ EIAVNISAPM QLTKLSLTWL SYPGIILNIG STFAAIGYPG YATYCATKAA LHRFSEAMQR ELKDTGRQVL FVAPRATDTD LNDQRVTALN KKLGNSTDSP KAVAKQILKT LQTEQKVCWI GWPEKLFVRI NQLFPSLVAS SIHKQKKHLN KSLSDINE
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