Gene Ping_0950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0950 
Symbol 
ID4626783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1187341 
End bp1187988 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content38% 
IMG OID639796164 
ProductTPR repeat-containing protein 
Protein accessionYP_942390 
Protein GI119944710 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.265468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTA CAAATTTTAC AATATCACTA CTGGGCTTCG CACTGTTATT AGGCAGCAGT 
TTTACAGCAG CACAAACAGT AGCGGGTACT TTGCTCAATA TTCAACATGA ATGGGCCAGC
TGCCAATACA ATCTGGTCGA AAAAGATCTT AAGATCAGTT GTCTGGAAAA AGTCATCATC
GCCAATGAAA ATGCATTAAA AATCACGCCT GCAAGTAGCA AGCTAAAAAT ATGGTTAGCG
ATTAATAATA GTTCATTGGC TGGCGCAAAA GGTGGCTTAG GTGCATTATC ATTAGTCAAA
AAATCAAAAC AATTATTAGA AGAGGTGATT GCAGTCAATC CAGCAGTGCT TGAGGGCTCC
GCATATACCA GCTTAGGTTC GTTATACTAT CAAGTACCAG GTTGGCCAAT TGGTTTCGGC
AATGATAAAA AAGCGGAAGT AATGCTTAAA AAAGCGTTAG CAATCAATCC TAATGGTATT
GACCCAAACT ATTTTTACGC TGATTTTTTA GCGCAAAACG GTAGAAAAAA AGAAGCCATT
GCACACTTTA AAAAAGCTCT ACTTGCATCA TTACGCCCTG CTCGCCCATT AGCCGATAAA
GGTCGTTTGC AAGAAATTGC CAATAAACTT AAGGAATTAG AAAATTAG
 
Protein sequence
MKTTNFTISL LGFALLLGSS FTAAQTVAGT LLNIQHEWAS CQYNLVEKDL KISCLEKVII 
ANENALKITP ASSKLKIWLA INNSSLAGAK GGLGALSLVK KSKQLLEEVI AVNPAVLEGS
AYTSLGSLYY QVPGWPIGFG NDKKAEVMLK KALAINPNGI DPNYFYADFL AQNGRKKEAI
AHFKKALLAS LRPARPLADK GRLQEIANKL KELEN