Gene Ping_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0889 
Symbol 
ID4625228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1114164 
End bp1114790 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content37% 
IMG OID639796093 
ProductDTW domain-containing protein 
Protein accessionYP_942330 
Protein GI119944650 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.458899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAA GAGCTGTTTG CAAACGCTGC TTAAAAGCCC AATCTGCCTG TATCTGCTCA 
GCGATCCAGT TGATTGATAA TCAACACTTT GTGCATGTAT TGCAAGATCC CGGTGAAGAA
AAAAATGCGA TAGGCACTGC GCGAATTTTG GGGCTGTCAT TAAAACGATC AAAAATTAGC
GTAGGGGTAT TGTTTGATGC CGGTTTATTT GATTTACAGA ATAGCTATTT AGTTTTTCCC
GATGCCTCGG CAGTCCCTAC GGAGCAGCTT GTTAATCTGA AAAAAATTAA TAACCACAGC
GTTTTTATTT TGCTCGATGG CAGTTGGAAA AAAGCCTACA AATTATTGAT GAGTAATGTT
TTTTTACAGA ATTTGCCGAA GATATCAATT AATATAGATA AAAAAAGCGA GTATCGTATT
CGTAAATCAC CACGTGATGA TGGTTTGTCG ACGGTTGAAG CGGGTTATTA TTTACTTTCC
CAATTGGAAG AAAATAAAGA AAAATTTGTC CCCTTATTAA CCAGTTTTAA TAGAATGATC
GACTATCAAA TAGCATCTAT GCCGGCGGCG ATCTATAAAA AGCACTATCT GGATAAAAAA
CCAACATCCA AAGAAATGTT TAAGTGA
 
Protein sequence
MSKRAVCKRC LKAQSACICS AIQLIDNQHF VHVLQDPGEE KNAIGTARIL GLSLKRSKIS 
VGVLFDAGLF DLQNSYLVFP DASAVPTEQL VNLKKINNHS VFILLDGSWK KAYKLLMSNV
FLQNLPKISI NIDKKSEYRI RKSPRDDGLS TVEAGYYLLS QLEENKEKFV PLLTSFNRMI
DYQIASMPAA IYKKHYLDKK PTSKEMFK