| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0680 |
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| Symbol | |
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| ID | 4626477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 867495 |
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| End bp | 868100 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639795880 |
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| Product | putative type IV pilus assembly protein PilW |
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| Protein accession | YP_942132 |
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| Protein GI | 119944452 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.808717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAACTA AAAACAGAGG ATATTCATTA ATTGAACTGA TGCTGGCGCT ATTACTTGGC
TCAGTACTGT TATCTATGGT GATTGGCCTG TATGTCACCG GTGTCTCTTC CGGTGCAAAA
AGTTTAAAAT ATTCACGGTT ACGTACTGAT TTGCAGTCGA TTATGTTAAT TATGGAAACT
GATATCAGGC GGGCAGGATA CGGAGGCAGC GATTTTTTAG TGGGCAGTGG CGATACTAAA
ATGGTTGATA CATTTACTAG CGATACATTA AAGTGCATCG TCTATTCTTA CAATCATGAC
TCTGCCACCG CTATTACTGA TACAAATCGA ATGGGATTCA AATTTTTGCC TGCTGAGAAT
GAAATTAAAT TTGGCAGTGG AGTTGATCCC CTTGCCGCTC ATTGTGACTC AACAGGTTAC
TGGGAAGGAC TTTCAGATAA CAATTTTATA ACAATAACCG ATCTGACTTT TACTGAATCA
GTTGTTTCCA GTGCATCGGC AAGCATACGT TCTGTTGAAA TTCATCTGTC TGGCGAGCTG
GCCGCCGATA GCGATTATAA ATATGCCATT AACACTACGG TGCAAGTTCG AAATCTTGAA
CTCTAG
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| Protein sequence | MLTKNRGYSL IELMLALLLG SVLLSMVIGL YVTGVSSGAK SLKYSRLRTD LQSIMLIMET
DIRRAGYGGS DFLVGSGDTK MVDTFTSDTL KCIVYSYNHD SATAITDTNR MGFKFLPAEN
EIKFGSGVDP LAAHCDSTGY WEGLSDNNFI TITDLTFTES VVSSASASIR SVEIHLSGEL
AADSDYKYAI NTTVQVRNLE L
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