| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0648 |
|---|
| Symbol | |
|---|
| ID | 4626846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 833469 |
|---|
| End bp | 834506 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639795848 |
|---|
| Product | TRAP dicarboxylate transporter- DctP subunit |
|---|
| Protein accession | YP_942100 |
|---|
| Protein GI | 119944420 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAATA ATCTGTTAAA AACCAGCATC ACAGGATTTG TCACCTACGT CTGTTTTTCA
AGCATGTCAT GGGCATCTGG CCCTGAGCAT GTACTGCGTG TTGGGACATG GCTAAGTCCG
ACTCATACAA TGAATCAAAA TGTGCTTCCT ACTTGGGGCA ATTGGATTGA AGAGGCAACG
GATGGCCGAG TCACCATTAA ACTTGAGTAT GATGTGGGTC ATCCTAAAAG TTTGATTGAT
CTCGTTGAAG ATGGCGCGAT TGCTGCATCT TGGACTTTCC ACGGGTATTT ACCCGGACGC
TTTCTTTTGC CGCAAATGGC AGAACTGCCA GGCGCTGATG TTGGCGCAGA GGCTGCATCT
GTCGCTCATT GGCGAATTAA CGAAAGATTT TTCCAAAAAT CAGGCGAGTA TGATGGTGTT
GAGGTTGCGG GGCTTTTTGT TCATGGTCCA GCCCAAATTC ATACAACCAC TCCGATAGCT
TCAATTAAAG AACTTAAAGA TAAAAAAATT CGAGTCGGCG GTGGTACTGC GAGTGAAATT
GGCGAACGCC TGGGTATTAT TGGCGTGAAT GCGCCTGCCA ACAAGGCATA TGAGATGCTT
TCTCAAGGTG TTGCTGATGG TATTTTTATG CAAATGGATA TGATGAAAGT CGGTCGGTTT
AAAGATGTCG CACCTTATAC TCTTAAAATA CCTGGTGGTT TATATCTTGG CTCATTTGGT
ATCTTTTTAA GCCCTGACTT TATGGATGGA CTTTCAGAAA AAGATCAAGC AGCGATTAGA
AGCGTTTCAG GAGAGCGTTT ATCTGCGCTT GCAGGCAGAT CATGGGCTGA AGCTGATAAA
ATTGGCGAAG CAGATATCAT TGCAAGTGGC AGTCAAGTTA TTGACGCATC GGCAGAAGAT
ATTGCCTATT TTAATGAAAA AATCAAAGGA ATGGATGAGC AGTGGATTAA ATCAGCCAAT
AGTCGAGGCG TTGATGCAGA AGCCGCATTA AAGGCATTTA GAAACGAAGC TGAGAACTAT
CAACCAATTG ATTTATAG
|
|---|
| Protein sequence | MFNNLLKTSI TGFVTYVCFS SMSWASGPEH VLRVGTWLSP THTMNQNVLP TWGNWIEEAT
DGRVTIKLEY DVGHPKSLID LVEDGAIAAS WTFHGYLPGR FLLPQMAELP GADVGAEAAS
VAHWRINERF FQKSGEYDGV EVAGLFVHGP AQIHTTTPIA SIKELKDKKI RVGGGTASEI
GERLGIIGVN APANKAYEML SQGVADGIFM QMDMMKVGRF KDVAPYTLKI PGGLYLGSFG
IFLSPDFMDG LSEKDQAAIR SVSGERLSAL AGRSWAEADK IGEADIIASG SQVIDASAED
IAYFNEKIKG MDEQWIKSAN SRGVDAEAAL KAFRNEAENY QPIDL
|
|---|
| |