| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0636 |
|---|
| Symbol | |
|---|
| ID | 4624742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 818600 |
|---|
| End bp | 821038 |
|---|
| Gene Length | 2439 bp |
|---|
| Protein Length | 812 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639795836 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_942088 |
|---|
| Protein GI | 119944408 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTAG ACAGCAGTGT CTTAATGGTG ATCTTTGTTA TTTTATCTTT ACTGCTTGGT
GCGTTGATAA AATCGGTTTC CAAAACACTC TCCTCCCCCT ATTGTGTTAT TTTATTGCTA
GCTGGCCTAA GCCTTGGTCT CTATGGGCGT ACAGAGCACA TACAGGCGAA TTTACCCGGA
TTAAACAGTG CACTAAGCAC TTTGGCACAG GTTGATCCGC ACCTTATTCT ATTATTATTT
TTACCCACGC TCATTTTTGA ATCTGCATTT TCCATGGATC CCCATCTGTT TAAACGTATG
ATCAAACAGA TAATGGTATT AGCGGTACCC GGATTGATTT TCTCCACCGC GCTAACCGCT
GTTTTAACCT TCTATCTTTT TCCCTGGCAA TGGTCATGGA CAGTGTGCTT TTTATTTGGT
GCCCTGATCA GTGCAACGGA TCCTGTTGCC GTTGTCTCCT TATTAAAAGA AATCAGTTCA
CGAAAACGCC TGGAAACCCT GATTGAAGGA GAATCATTAT TAAATGATGG TACCGCCATT
GTATTATTCA GCCTGTTTTA TGGCTTATTA ACCTCAGGAG GAGAGGCTGA TTTAGATATT
CTGGCAATAT CAAGCAGTTT TATCTCAGTG GTATTGTTAG GCCTGTTGAC TGGTTTAGCA
GTTGGGGCAG TATTTTTATT TTGGATTGGG CGTCTATTTA ATCAGGCAAT CATTGAAATA
ACCCTGACTA TTTCGGCCGC GTATATTGCT TATTTTATTG CGGAAAATGT ATTTCATGTG
TCTGGGGTTG TCGCTGTAGT GAGCTTAGGA GTGCTGGTTG CAAGCGTAGG ACGCACCCGC
ATTTCACCTG GCGTCAGTGT TTTTTTACAT CACTTTTGGC AAATGATGGC GCACATTGCC
AATACGCTTA TTTTTATTTT AGTGGGTATT ATTATCGCCT CGCGGATCCG TTTGGACAAC
TGGGAATGGT GGGTCACCTT AGCGGGGTTA TATATTGGCA TTCAACTTAT ACGGGCGGTG
ACGGTATTCA CTTTTATGCC GATCTTAAAA CAGGCGGGTA TCAGCAAAGA AAAAGCGATT
GTTGTTATCT GGGGCGGATT GCGGGGAGCG GTCTCTTTAG CATTAGCTCT GATTATTGCT
CAGGATAACT TCTTACCAAA AGAACTGGGT GATCAAATCT TATTTTTAAC GGCAGGTATT
GTGGTATTAA CTATTCTTAT AAACGCAAGC AGCATGAGCC TGCTATTGCG GTATTTTGGT
TTAGATAAAT TACCCGAAGC GAAACAGGCC AGCCTGATAA AAGCGCAGCA AAGCATTAAA
CAACATTTGA CAAATGACTT ACTTTTATTG CAAAAAAACG AATTTTTACA ACGTGCCGAT
TGGAAAAGCT TAACTGAGCC CCTCCAAGAA GCTCAACCCA TCAGCGCGGT GCAGGAAGCT
GATTTTCTGG TCGCTTTCAG GCACCGTTTA TTAGAAACTG AAAGACAATT TTATTGGTCA
CAATTTAGCC AAGGAGCCTT AACCGGACAG GCAACCAAAC ACTTGGTCAC CGCAGTTGAA
TTTGCCTTAG ATGGTAATGC TGAAATTTCG CCCCGCAAGA CACTTTTTGA GTCTTGGAAA
ACCCCCTATT ATATACGTTG GTTTTATCAC ATCCCCTTGT TAAATAAAAT AGTGGTCAAT
TTTTCATTTG AACGCTTATC ACTCAGTTAT GATACTGCCC GCGGCTTTAT TCAAGGGCAG
GAAGAGATCC AAAAACATCT GCAGTCACTG TCCCCTTCAG AGCAGGACAG ACAATTAGTG
GAGCAGGAAA TTGAGGACAA TAAAAAACAC ACTCGTTTAT ATATTCAAAA GATCAGAGAA
AATTTTCCCG CACTATCCTA CAGTCTGGAA ACCTATGCTG CACATAGATT ACTGCTTCAT
TTAGAACGTG TTTATTTGAA TGAGTTAATC GCCGAGGGGG TCTTTGATGA GAGCGAAGCT
AAAAAACTGA CGGAGGAAAT AGAGTATAAA ATAATACATC TGGCGAAACC ACCTCATAGC
ATTAGCTCCA AACAAATCAG TCAACAGTTA GCTTTAATGC CATGGACAAA AAACGTCAAG
GAAAAAAGTC TATTTCTCCT TAGTCGCTTA GCCATACGGG AAATTTACAA TAATAGCGAG
ATGATTTGTC ATCAAAATAA AAGTACAGAC TCAATCGCCT TAATTTTACA TGGCAAGGTC
GTATTAATGA GCAGTACTCA TGAAGAGATT GTTGAAACAG GCGCTGTGAT TGGTATTGAT
GCTTTTCTAA CCCATCGCTT TAAGATCAGT GCAAAAGCGA TAACCCCTGT TGAACTTATC
TGGTTAAATA TAGAACACTT AAAAAAAGTC ATTGTACAAG ATAAACAACT TGAGAAAATG
TTTGACAGCA ACTTAACCCA CCAAAACCAC CGGGAATAA
|
|---|
| Protein sequence | MHLDSSVLMV IFVILSLLLG ALIKSVSKTL SSPYCVILLL AGLSLGLYGR TEHIQANLPG
LNSALSTLAQ VDPHLILLLF LPTLIFESAF SMDPHLFKRM IKQIMVLAVP GLIFSTALTA
VLTFYLFPWQ WSWTVCFLFG ALISATDPVA VVSLLKEISS RKRLETLIEG ESLLNDGTAI
VLFSLFYGLL TSGGEADLDI LAISSSFISV VLLGLLTGLA VGAVFLFWIG RLFNQAIIEI
TLTISAAYIA YFIAENVFHV SGVVAVVSLG VLVASVGRTR ISPGVSVFLH HFWQMMAHIA
NTLIFILVGI IIASRIRLDN WEWWVTLAGL YIGIQLIRAV TVFTFMPILK QAGISKEKAI
VVIWGGLRGA VSLALALIIA QDNFLPKELG DQILFLTAGI VVLTILINAS SMSLLLRYFG
LDKLPEAKQA SLIKAQQSIK QHLTNDLLLL QKNEFLQRAD WKSLTEPLQE AQPISAVQEA
DFLVAFRHRL LETERQFYWS QFSQGALTGQ ATKHLVTAVE FALDGNAEIS PRKTLFESWK
TPYYIRWFYH IPLLNKIVVN FSFERLSLSY DTARGFIQGQ EEIQKHLQSL SPSEQDRQLV
EQEIEDNKKH TRLYIQKIRE NFPALSYSLE TYAAHRLLLH LERVYLNELI AEGVFDESEA
KKLTEEIEYK IIHLAKPPHS ISSKQISQQL ALMPWTKNVK EKSLFLLSRL AIREIYNNSE
MICHQNKSTD SIALILHGKV VLMSSTHEEI VETGAVIGID AFLTHRFKIS AKAITPVELI
WLNIEHLKKV IVQDKQLEKM FDSNLTHQNH RE
|
|---|
| |