Gene Ping_0614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0614 
SymbolproX 
ID4624351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp795609 
End bp796616 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content43% 
IMG OID639795814 
Productglycine betaine transporter periplasmic subunit 
Protein accessionYP_942066 
Protein GI119944386 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0146965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTATA TACGAAAGAC AATACTTACA ACGGCAATCG CTGTTTCAGC AACCCTGTCA 
TCCGCTGTCT GGGCTGAAAA CCTGCCAGGC GATGGTATTA CTGTTCAACC GATTCAATCC
ACCATTGCGG AAGAAACTTT TCAGACCTTA ATTGTCAACA AAGCAATGCA GGCGCTTGGT
TATACTGTCA AAGGAACTAA AGAGGTTTCC TATAACGTTG CTTACACTGC GATTGCAGCA
GGCGATGCCA CCTATTTAGC GGACAACTGG AATCCATTGC ACAAAGATAA ATACGCAGCC
GCAGGCGGCG ACGAAAAATT TTACCGCAAA GGTGAATATG TCAAGGGTGC AGGACAAGGT
TATCTGATTG ATAAAAAAAC CGCCGACAAA TATAATATTA CCAATATTGC ACAACTTAAA
GATCCGGAAA TTGCCAAACA CTTTGATGCT AATGGCGATG GCACAGCAGA CTTAACCGGA
TGTAACCCGG GATGGGGTTG TGAAGGCGTT ATCGAACACC AACTTGATAC TTTTGGCCTG
CGTGAAACAG TAGATCATAA CCAGGGTAAC TATTCGGCCA TTATCGCAGA TACTATCGCC
CGTTATAATA AAGGGGGTTC CATCTTTTAC TACACTTGGA CTCCTTACTG GGTAAGTGGT
GTATTGGTTC CCGGTAAAGA TGTGGTGTGG TTAGAAGTCC CATTCTCATC ACTTCCAGGC
GAGCGCAGCA ATGTTGATAC TACACTGGCT AATGGAAAAA ATTACGGTTT CCAAATGAAC
TCCATGCACA TAGTTGCCAA CAAGAAATTT ACTGATGCAA ACCCTGCAGC AGCTGAATTG
TTTGCTATTA TGAAGCTCAA TATCAATGAT ATCAGTGCTG AAAATGGAAT GATGGCAAAA
GGGGCAAATA CGCAAAAAGA TATTAATGCC CATGCCGATG GTTGGATCAA AGCCCATCAG
AAACAGTTTG ATGCTTGGAT TGAAACTGCC AAGGAAGCGG CAATGTAG
 
Protein sequence
MKYIRKTILT TAIAVSATLS SAVWAENLPG DGITVQPIQS TIAEETFQTL IVNKAMQALG 
YTVKGTKEVS YNVAYTAIAA GDATYLADNW NPLHKDKYAA AGGDEKFYRK GEYVKGAGQG
YLIDKKTADK YNITNIAQLK DPEIAKHFDA NGDGTADLTG CNPGWGCEGV IEHQLDTFGL
RETVDHNQGN YSAIIADTIA RYNKGGSIFY YTWTPYWVSG VLVPGKDVVW LEVPFSSLPG
ERSNVDTTLA NGKNYGFQMN SMHIVANKKF TDANPAAAEL FAIMKLNIND ISAENGMMAK
GANTQKDINA HADGWIKAHQ KQFDAWIETA KEAAM