Gene Ping_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0488 
Symbol 
ID4626868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp619437 
End bp620663 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content39% 
IMG OID639795680 
ProductROK family protein 
Protein accessionYP_941943 
Protein GI119944263 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0318886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.538791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACGAA ATAATCAGCA AGCAGATTCC GTCATTGCCA GCGTTGATCA TATTAAACAA 
CTAAACAGTG CAACAATTTA CAAAGTAATT GAAAAATACG CCCCTATTTC TCGCGTTAAG
ATTGCCAATG TAAGCAAACT AGCACCGGCC AGCGTAACCA AAATCACCCG TCAACTTCTT
CAACAGGGCA TTATTTGCGA GACTGCACGA CAAGCTTCAA CCGGTGGTCG TTGTGCTATT
TCTCTGGCAC CTAATACGGA TAATATTCAT GTCCTTGCGA TTAAAATAGG GCAGAAAACA
TTATCTTTAA GTTGTTATAA CTTAGCGGCC GAACAATTGA CTACAAAAAA AATCAAGATA
AAAAGTGAAG ATGAACAGCA ACTGCTTGCA TTTCTGATTA GCGAAATCGA CAATTTCATC
AAAAAACAAC AAAAAAACAT GGGAAAAATA TCTGCTATTG CCATCTCTTT ATCAGGTTTA
ATCAATCCAA AAAAAGGCGT TGTGCTCTAT AGCCCCTACC ACCCGTTAGT TAACTTTCCC
TTGGCGAATA AAATTGAACA GCATTTTCAG CTGCCTACTT TTATTGGTAA CCATACGCGC
TCATTAGCAC TGGCTGAACA CTATTTTGGT GCGTCGAAAG AGTGTTTAGA TTCGATTTTG
ATTAGCATTC ACCATGGTGT TGGTTCGGGC ATTATTATTG AGGGTAAAGC GTTATTAGGA
CAGAACTTTA ATATTGGTGA AATAGGCCAT ATACAAGCAA ATCCTGCGGG GCGGCAATGC
CATTGTGGTA ACTTTGGGTG TTTAGAAACA GAAGTGAGTG ATCGGGTTAT TGTTGAGAAA
GTGGCAATCG CTATCAAACA GGGCAGTTTT ACCCGCTTAA GCTTAGATTC CCTGAACATT
GAAAAAATTT ATCAGGCAGC AGAAGATAAT GATCCCTTGT GTCAAAAGAT AGTCGAAGAT
GCTGCAACCT ATTTAGGTAA AGCCATCGCC ATTTTAATTA ATCTATTAAA TCCGCAAAAA
ATCATTATTG CGGGTAAGAT CATCCGCGCA AAAACAAGTT TATTATCCAC CATTGAGCAA
TGTATCGCTC ACCAGGTATT ACCCAACTTT CAGCATAAAG TGCAAATAGA GACCTCTCTA
TTAGAACCAG ATACTACACT TGCCGCCTTT GCTTTGATCA AACAAGCCAT TTATGAGGGC
GATTTACTGC AACAGATTCA TGGCTAA
 
Protein sequence
MVRNNQQADS VIASVDHIKQ LNSATIYKVI EKYAPISRVK IANVSKLAPA SVTKITRQLL 
QQGIICETAR QASTGGRCAI SLAPNTDNIH VLAIKIGQKT LSLSCYNLAA EQLTTKKIKI
KSEDEQQLLA FLISEIDNFI KKQQKNMGKI SAIAISLSGL INPKKGVVLY SPYHPLVNFP
LANKIEQHFQ LPTFIGNHTR SLALAEHYFG ASKECLDSIL ISIHHGVGSG IIIEGKALLG
QNFNIGEIGH IQANPAGRQC HCGNFGCLET EVSDRVIVEK VAIAIKQGSF TRLSLDSLNI
EKIYQAAEDN DPLCQKIVED AATYLGKAIA ILINLLNPQK IIIAGKIIRA KTSLLSTIEQ
CIAHQVLPNF QHKVQIETSL LEPDTTLAAF ALIKQAIYEG DLLQQIHG