| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0457 |
|---|
| Symbol | |
|---|
| ID | 4626734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 579826 |
|---|
| End bp | 580971 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639795651 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_941914 |
|---|
| Protein GI | 119944234 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.217311 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0288565 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAA TAAAACTCGC TTTTGTCACT CAGTTTCCAA TTGATATAAA TCGTCCTCTC
GGTGGTGTAG AAGCGGTTAG TGTTAACTTG CTCCGTTCGT TGTCGGCTTA TGCTGAACTT
GATATTCAGG TTGTTACCCT ATGCCCTAAT ATTACTCAAG TAACGCAAGA GAGTTGGGAG
AGGGTTACAG TTCATCGTTT GCCAAAGCCG CGTGGCAGTG AGCTAATTAA TGCGATCACT
AAAAGTAAAG CACTGGTTGC TGATTATGTG CGGAAGTTGC AGCCAGATTT AATTCATGCT
CATGATACCT ATGGAATTAT GGTTAATGAT TTAGCTATTC CCAAGGTGTT TACCGTGCAT
GGCTTTATTT ATGGTGACAC GCTATTTGCG AATGGCCGAT TTAAGTGGCT AAGATCAAAG
TTATGGGAAT ATATTGAGAA GAGAAGTTGG GCCAAACAAC CCAATATCAT CTCAATTAGT
CCTTATGTTC GGGAGAACGT ATCGTCAGTT ACGTCTGCTA ATATTTATGA TATTGATAAT
CCTATTTCGG ATAAGTTCTT TGTATTAGAG CGCAATGAAA AAGTAGGTAC TATTTTTACA
TCGGCCGTAA TCTGTCCACG TAAAAATTCC TTGCTATTGG TTAAAGCAGT TGGTCTGTTG
GTGGCTGCCG GGTATAACGT TCAGCTCAGA ATCGCAGGTA GTGTAGGAGA TGAAAGGTAC
GCACAAGAGC AACAACGGTG GATATTAGAA AATAATCTTG AAAAGCATGT GCACTTATTG
GGCAGAATCT CAACCGAAGA TGTCATGAAA GAGTTAAGTT CAGCGTCTAT TTATGCATTA
ACCTCTTTAG AGGAAAACTC ACCAATGGGT ATTGAAGAGG CAATGGCAGT TGGTGTACCC
GTTGTTACTT CAAATAGATG CGGTATGCCC TACATGGTTA AACATAGTGA AACTGGCTAT
TTAGTTAATC CTTTTGACGA AAATAATATT GCTGATAAAT TCAAAAAAAT ATTAGGTAAC
AGTGAGCTAC AATTGGCTAT GTCTATAAAA TCAAAAGCAT TGGCATTGGA TTTATATCAT
TCTGATAATG TTGCGCGACG AACTTATGCT GTATATCGAG AATTGCAAAG CAATGCTAAG
TCATAA
|
|---|
| Protein sequence | MKPIKLAFVT QFPIDINRPL GGVEAVSVNL LRSLSAYAEL DIQVVTLCPN ITQVTQESWE
RVTVHRLPKP RGSELINAIT KSKALVADYV RKLQPDLIHA HDTYGIMVND LAIPKVFTVH
GFIYGDTLFA NGRFKWLRSK LWEYIEKRSW AKQPNIISIS PYVRENVSSV TSANIYDIDN
PISDKFFVLE RNEKVGTIFT SAVICPRKNS LLLVKAVGLL VAAGYNVQLR IAGSVGDERY
AQEQQRWILE NNLEKHVHLL GRISTEDVMK ELSSASIYAL TSLEENSPMG IEEAMAVGVP
VVTSNRCGMP YMVKHSETGY LVNPFDENNI ADKFKKILGN SELQLAMSIK SKALALDLYH
SDNVARRTYA VYRELQSNAK S
|
|---|
| |