Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0419 |
Symbol | |
ID | 4623835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 529498 |
End bp | 530031 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639795616 |
Product | transcriptional regulators, LysR family protein |
Protein accession | YP_941879 |
Protein GI | 119944199 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0271253 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTTTTA GTCTTTATTT AAGGGATAGA AAGGCTGCAG AATCTACACT ATTAGACAAT AGTGTAGATT TAGCCATGGT ATTTGAACCA GTCTACATGA ATGAGCTGCA GATTCTTATA TGTAAAGAAC AACAGCTATA CGCCATTATG CCAAGTGGTC ATCCATCAGC TGGAATAAGT GAACTTAAAT TAAGTGAATG TATGGCTTAT CCATTAGCTC TTCCCACAAG CGAGTACGGC GTGCGTCATA TTTTGGATTT TAAAGCCAAT AGATCCATGC TAGATATGTA TGCCGCAGTG GAATCGGACA GCTTTGAGTT TCTGCGTAAT TATGCGATCA ACGAGAGTTG CATCACCTTT CAGATAGAAA TTGGATTGCC GCAAATTGTG GAAGAGTTGA GACTCACTGC GCGGCCGATA TCAAAGGCCG ATATGGCAGT CGGCAGTATG TACCTTATTC AGAAAAAAGG CCGTACATTA CCCGTGGCTG CTGTACGTTT TGCAGAACAA CTGATACAAA CACTGTCACA GTAA
|
Protein sequence | MTFSLYLRDR KAAESTLLDN SVDLAMVFEP VYMNELQILI CKEQQLYAIM PSGHPSAGIS ELKLSECMAY PLALPTSEYG VRHILDFKAN RSMLDMYAAV ESDSFEFLRN YAINESCITF QIEIGLPQIV EELRLTARPI SKADMAVGSM YLIQKKGRTL PVAAVRFAEQ LIQTLSQ
|
| |