Gene Ping_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0419 
Symbol 
ID4623835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp529498 
End bp530031 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content42% 
IMG OID639795616 
Producttranscriptional regulators, LysR family protein 
Protein accessionYP_941879 
Protein GI119944199 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0271253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTTTTA GTCTTTATTT AAGGGATAGA AAGGCTGCAG AATCTACACT ATTAGACAAT 
AGTGTAGATT TAGCCATGGT ATTTGAACCA GTCTACATGA ATGAGCTGCA GATTCTTATA
TGTAAAGAAC AACAGCTATA CGCCATTATG CCAAGTGGTC ATCCATCAGC TGGAATAAGT
GAACTTAAAT TAAGTGAATG TATGGCTTAT CCATTAGCTC TTCCCACAAG CGAGTACGGC
GTGCGTCATA TTTTGGATTT TAAAGCCAAT AGATCCATGC TAGATATGTA TGCCGCAGTG
GAATCGGACA GCTTTGAGTT TCTGCGTAAT TATGCGATCA ACGAGAGTTG CATCACCTTT
CAGATAGAAA TTGGATTGCC GCAAATTGTG GAAGAGTTGA GACTCACTGC GCGGCCGATA
TCAAAGGCCG ATATGGCAGT CGGCAGTATG TACCTTATTC AGAAAAAAGG CCGTACATTA
CCCGTGGCTG CTGTACGTTT TGCAGAACAA CTGATACAAA CACTGTCACA GTAA
 
Protein sequence
MTFSLYLRDR KAAESTLLDN SVDLAMVFEP VYMNELQILI CKEQQLYAIM PSGHPSAGIS 
ELKLSECMAY PLALPTSEYG VRHILDFKAN RSMLDMYAAV ESDSFEFLRN YAINESCITF
QIEIGLPQIV EELRLTARPI SKADMAVGSM YLIQKKGRTL PVAAVRFAEQ LIQTLSQ