Gene Ping_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0418 
Symbol 
ID4623834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp529139 
End bp529501 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content42% 
IMG OID639795615 
Producttranscriptional regulator of LysR family protein 
Protein accessionYP_941878 
Protein GI119944198 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0250154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAC TTATGGATTT TAATTATTTT CAGGTAGTCG CTAAGGGAGG TTCAATTCGT 
AAGCCTGCAG ACCAACTTTC GATCACTTCA ACAGCACTTA ACCGACGTAT TCTTAGCATG
GAAGATGAAC TAGGTGAAAA AATATTTGAG CGTCAAGCCA GTGGTCTACG ACTTTCTGCT
GCAGGAGAGT TATTCTTACA TCATGTCCAA AGACAACTTG CTGATCTTGA ACGTGTTAAA
AGTCAAATAT CAGATCTTAG CGGTGTAAGG CGAGGGCATG TAAATATCGC ATGTAGTCAG
GCACTGCTTA CGTCTTTTTT CCTAAACAAA TCGCACGTTT TCGGCACCAA CATCCTGCGG
TGA
 
Protein sequence
MKQLMDFNYF QVVAKGGSIR KPADQLSITS TALNRRILSM EDELGEKIFE RQASGLRLSA 
AGELFLHHVQ RQLADLERVK SQISDLSGVR RGHVNIACSQ ALLTSFFLNK SHVFGTNILR