| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0412 |
|---|
| Symbol | |
|---|
| ID | 4623828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 524283 |
|---|
| End bp | 525062 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639795609 |
|---|
| Product | ABC transporter foramino acid ATP-binding protein |
|---|
| Protein accession | YP_941872 |
|---|
| Protein GI | 119944192 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.123929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.16537 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGATC AATCTATTGT CATTTCGGTA AAAAACCTCA ATAAAGACTT CGACGGCGTA
GAAGTGCTCA GGGATATCAA TATTGATATC CTCTCGGGTA CGACAACCTG CATTCTTGGT
CCTAGTGGTT CGGGAAAATC AACATTTTTA CGCTGTTTAA ACTGGTTGGA ACATCCCAGC
AGTGGAGAAA TAAGGATTGA CGGTGTAGTC ATTGGCCAAA GTAGCAAAAA AGCTAATGGG
AAGAGGGCAA GTAGTCGAGC GCTAAATAAA GTGAGAACTA ATATCTGTAT GGTGTTTCAG
CATTTTGCTC TTTGGCCTCA TTTAACGGTA TTAGAAAATG TAACGATAGC ACCGATCAAT
GTGTTGGGAC GCTCTAAGAT TGAGGCAGAG CAGATGGGAA AAACACTATT AAAACGTGTG
GGCTTAGAAG ATAAGCTCCA CGTCTACCCC CATACACTTT CTGGGGGGCA AAAACAACGA
GTAGCGATTA GCCGAGCCTT GGCGATGGAG CCAAAAGTAC TGCTATTTGA TGAGCCAACC
AGCGCCTTGG ATCCTGAAAT GGTGAACGAG GTATTGAGTG TAATGCGAGA GCTGGCTAAA
GACGGTATGA CGATGGTTGT GGTAACACAT GAGATGAATT TTGCCAGTGA TGTGGCTGAT
AGCATAGTAT TTATGGATAG AGGGTTGATC CGAGAGGTTT CTCCTCCTGA GGTCTTCTTT
AATAATCCAC AGACTGAGCG TGCGCGTCAG TTCATTGCGC CTGGCTGCCA TACTCCATAA
|
|---|
| Protein sequence | MDDQSIVISV KNLNKDFDGV EVLRDINIDI LSGTTTCILG PSGSGKSTFL RCLNWLEHPS
SGEIRIDGVV IGQSSKKANG KRASSRALNK VRTNICMVFQ HFALWPHLTV LENVTIAPIN
VLGRSKIEAE QMGKTLLKRV GLEDKLHVYP HTLSGGQKQR VAISRALAME PKVLLFDEPT
SALDPEMVNE VLSVMRELAK DGMTMVVVTH EMNFASDVAD SIVFMDRGLI REVSPPEVFF
NNPQTERARQ FIAPGCHTP
|
|---|
| |