| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0260 |
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| Symbol | |
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| ID | 4626647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 339696 |
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| End bp | 341531 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639795458 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_941726 |
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| Protein GI | 119944046 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.832837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTATC ATAAAAATTC TACAAAACCA GCCTATCGTA CGTTAACATT CCTATTTACA
TCTTTGCTGG TTTTGTTATT TTTCTTGCTG TCTACTCGCT TTTCTCTTGC TGAATCAACT
ATTAGCCTAA AGCAAGTGAT GCAAGGACAA AGCACTGATT TAAGTATTTA TTATTTAGAA
GACCCAGAAA AAAGTTATAA CATTGATCAA TTACAATCAG CCCCCTTATT CTCAAAATTT
CAGCCCCTGC CTAATGGAAA AAGTAGTTTT GGTATCAGTT CCTCAGACTA CTGGCTTAAA
ATAATAGTGA GAAATACTGA CGATACAGAT TTGTTATGGT TACTAGAGAT AGTTCATCAG
CAATGGGATC ATGTGAACTT ATATATTAAC GGAGAAAAAA AATTTTATGC CGGCGATCAT
ATCCCCTTTA CACAACGTGC TTTTGCATCT GAAAACAATG TCTTTGAAAT AACTACCGCT
GTAAAGGCTG AACAACAATT ATTGATTCAT TTTTCTTATG AACAAGCAGG CCAAGCTGAA
ACACAGATTC GACTATGGAC AGTAAAAGAA TATAGTCAGT ATTATGCAAA CCGATATTTT
ATTATTGGAG CCATGTTTGG TTTAGGCATA ATACTGTTTT TTTATAATCT ATTTATTGGC
TATTCCACTC GCTTGCCCCA ATTTCTTTGG TATAGCGGAT ACATTATTAG CGCACTTTTA
GCTTTCTTGA CTGATAAAGG ATTTGGCTAT CGCTACCTCT GGTCAAATTC AAACTGGTTT
AGCGATTTTT CTCCTGTTTT TTTCATTGCC TTAGTGATGA TAATGGCCAC TCAGTTTACC
CGCTCATTTT TGAATACTGC AACTGAATCA GTGAATATCG ACAGGCTACT ACAATTAATA
TTTGTTGTAG CTGGACTTTC CATTTTTTTC AGCTTAATAG GTTATCGTGA CTATGCCGTT
ATTTTAGGTC TTCTTAGCAT GTTAACTTCT ATTTTTTTCC CGGTTATCGG TTGGGTCATC
TATTTAAAAG GCAGGTCATA TGCCCGTTTT TATATTTTGG GATGGAGTAT TTGGTCTTTG
GGTATGATTT TGGCAGTATT ACAGCATATC GGCATGATTC CAGTAACGCT ATACTCTGAT
TTATCCACTG GACTGTGTTT TTCTATTGAA GCAGCTCTTC TTTCCTTTGC CCTTGCAGAC
CGGTTTAACC AACTCAGGAA CGAAAAAGAA GAAATTGAAT TAATTCATAT TGAGCATCTA
AAAAACGATC AGCAACTACT GGAGCAACTT GTCACCGAAC GTACCGAAGA ACTGGAGCAA
GCAAAAGATC GAGCAGAGTT ATTAGCACGA ACCGATCCCC TAACTAACAT GTTAAATCGT
CGCGCCTTTT TTGAGTGTGG TTCAGTAGAA ATTAAACGTA GTTTACGCTA TAAATCATCG
CTGGCTATTA TGATGATCGA TCTCGATCAC TTCAAATCCA TCAATGATAA CTATGGTCAT
GCTGCTGGTG ATAATGCTCT GTTATCCGTT GCTAATACAT TAAAAGCGAT GATACGTAAT
GTGGATATCA TTGGACGGAT AGGAGGAGAA GAGTTTGCGG TAATAATTCC CCATGCTGAT
CTGGAGATTG CAACTGAACT GGCGCAACGG CTTAGACTAG GCATCGAAAA AGTAGAGATA
ATTATTGATA ACCAGCCGGT AAAGATCACC GCATGTTTTG GTGTCACTAG TATAGATATA
AAAAGCGAAT CATTAGATGA AGCATTAAAA AGAGCCGATA AGGCACTTTA TCTGGCAAAA
GAAAATGGCC GAAACCGGGT TGAACAGCTT GCTTGA
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| Protein sequence | MPYHKNSTKP AYRTLTFLFT SLLVLLFFLL STRFSLAEST ISLKQVMQGQ STDLSIYYLE
DPEKSYNIDQ LQSAPLFSKF QPLPNGKSSF GISSSDYWLK IIVRNTDDTD LLWLLEIVHQ
QWDHVNLYIN GEKKFYAGDH IPFTQRAFAS ENNVFEITTA VKAEQQLLIH FSYEQAGQAE
TQIRLWTVKE YSQYYANRYF IIGAMFGLGI ILFFYNLFIG YSTRLPQFLW YSGYIISALL
AFLTDKGFGY RYLWSNSNWF SDFSPVFFIA LVMIMATQFT RSFLNTATES VNIDRLLQLI
FVVAGLSIFF SLIGYRDYAV ILGLLSMLTS IFFPVIGWVI YLKGRSYARF YILGWSIWSL
GMILAVLQHI GMIPVTLYSD LSTGLCFSIE AALLSFALAD RFNQLRNEKE EIELIHIEHL
KNDQQLLEQL VTERTEELEQ AKDRAELLAR TDPLTNMLNR RAFFECGSVE IKRSLRYKSS
LAIMMIDLDH FKSINDNYGH AAGDNALLSV ANTLKAMIRN VDIIGRIGGE EFAVIIPHAD
LEIATELAQR LRLGIEKVEI IIDNQPVKIT ACFGVTSIDI KSESLDEALK RADKALYLAK
ENGRNRVEQL A
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