Gene Ping_0214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0214 
Symbol 
ID4627152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp267796 
End bp269115 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content43% 
IMG OID639795403 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_941680 
Protein GI119944000 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.83663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCTC GCGGTAAATG GTCCTGGTTA CACAGCCCCA TAACAGGTGG TATTCTTTTA 
ATTATTGCAG CAACGACTGC ACTGTTCTGG GCAAATTTAG CCCCCTCTCT CTACCATCAC
GCTTGGCATG ATGCTCTATT CTCGGTTTCT TCAGGATTTA GCGCCACTAT CTATTCGATT
AGTCTCCATC AAATTGTAAA TGAATTCTTG ATGGCGATTT TCTTCTTTTT CATTGGCTTA
GAAATGAAAC GTGAACTCTT AGATGATGAC CTTTCTACCC TTAAAAAAGC CGCTTTACCA
TTATTTTCCG CCTTAGGGGG AGTTGTTCTT CCCGCCAGCA TCTATTATTT TTTCAATGCA
GGGACTGATA CGGTTAATGG CTGGGGTATC CCAATGGCAA CGGATATTGC CTTTGCATTA
GGTGTGCTGG CAATGGTCGG CAGTCGTGTC CCTCTTTCTT TAAAAATATT TCTATCGGCA
TTGGCGATCG GTGATGATTT AATGGCAGTA TTGGTTATTG CCATCTTCTA TACCGAGCAA
ATCTTTGTTA ATGAATTGCT GGTTGGTTTC TTAGGATTAA TTGTCCTGGC AGTCGCCAAT
AAAATGGGTG TACGCAACCG CTTAGTTTAT TACTCTATTG GTTTAATCAT TGTCTGGATC
AGTTTTTTAG CTTCTGGGGT CCATGCGACT ATTGCGGGCG TTGCTGTCGC GTTTACTATC
CCTTCTCGCC GGGAAATATC CATGGGAAAT TATTTAATTA CGGCTAAAGG GTTACTTAGC
GGCTTGGACA AGGAACGCCA CAATAAAGCC GATGTATTAA CTAAAAATGC CATTTCATCT
TTACGCGAAA TCAGAGATTT AAGTTATCAG GCATCGAACC CTTTACAACT TAAAGAAGAA
GCACTGCACC CTATTTCAGC CCTGTTTATT GTGCCATTAT TCGCACTGGG TAATGCCGGT
GTTATTGTGG ATGACAGCAT GCTGGCAGAG TTAACTAACC CTATTGTGTT AGGCATTGCA
GCCGGCCTTA TTATTGGTAA ACCTCTGGGT ATTTTTCTGT TCGCTAAGCT TCTGACCCTT
TTAAAATTGG GCCAACTCCC GGAGGGTGTC ACATGGAGGC ATATTATCGG GACCGGTTTC
TTAGCAGGTA TGGGGTTTAC TATGTCGCTC TTTATTAGCG ACCTGGCCTT CTCTGAGCCA
GAGCAGAAGA TTGTCGCTAA AGTTGCCGTG CTGTTAGCAT CAATCATATC CGGTATTGTA
GGTTATCTGA TTTTGATCAG CGCCCCGGTT ATCAAAAAAG ACAATAAATT AAATAGTTAG
 
Protein sequence
MSSRGKWSWL HSPITGGILL IIAATTALFW ANLAPSLYHH AWHDALFSVS SGFSATIYSI 
SLHQIVNEFL MAIFFFFIGL EMKRELLDDD LSTLKKAALP LFSALGGVVL PASIYYFFNA
GTDTVNGWGI PMATDIAFAL GVLAMVGSRV PLSLKIFLSA LAIGDDLMAV LVIAIFYTEQ
IFVNELLVGF LGLIVLAVAN KMGVRNRLVY YSIGLIIVWI SFLASGVHAT IAGVAVAFTI
PSRREISMGN YLITAKGLLS GLDKERHNKA DVLTKNAISS LREIRDLSYQ ASNPLQLKEE
ALHPISALFI VPLFALGNAG VIVDDSMLAE LTNPIVLGIA AGLIIGKPLG IFLFAKLLTL
LKLGQLPEGV TWRHIIGTGF LAGMGFTMSL FISDLAFSEP EQKIVAKVAV LLASIISGIV
GYLILISAPV IKKDNKLNS