Gene Ping_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0116 
SymbolmgsA 
ID4626185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp154335 
End bp154793 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content43% 
IMG OID639795312 
Productmethylglyoxal synthase 
Protein accessionYP_941589 
Protein GI119943909 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1803] Methylglyoxal synthase 
TIGRFAM ID[TIGR00160] methylglyoxal synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.503426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.542869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATATA TAACCCGCGA GTTGCCTAAA TATAAGCGGA TCGCACTCGT TGCACATGAC 
CATATGAAAA CAGAACTATT AAACTGGTCA CAAAGACGCA TCAATGTATT AAAAGACCAC
CAGCTCTATG CAACGGGCAC CACAGGCAGC TTATTGGCGA ATAAATTAGG TTTGCCCATT
GAGTGTTTGC TCTCCGGACC AATGGGAGGT GATCTGCAAC TTGGCGCCAA AATAGCAGAA
GGTGAAATTG ATCTGCTGAT ATTTTTTTGG GATCCGATGA ATGCTGTGCC GCATGATCCC
GATGTGAAAG CATTATTACG TATCTCTGCA GTATGGAACA TCCCCGTTGC TACCAATATA
TCCACTGCTG ATTTTATTAT CGATTCGTTA CATATTGGAA AAAGTTACAC TACGCGTATT
CCAGATTACC TCGGTTACAT GGCTGAACGC ACTGAATAA
 
Protein sequence
MQYITRELPK YKRIALVAHD HMKTELLNWS QRRINVLKDH QLYATGTTGS LLANKLGLPI 
ECLLSGPMGG DLQLGAKIAE GEIDLLIFFW DPMNAVPHDP DVKALLRISA VWNIPVATNI
STADFIIDSL HIGKSYTTRI PDYLGYMAER TE