Gene Ping_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0106 
Symbol 
ID4626175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp138640 
End bp139122 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content43% 
IMG OID639795302 
Productgeneral secretion pathway M protein 
Protein accessionYP_941579 
Protein GI119943899 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3149] Type II secretory pathway, component PulM 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.991113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAGC GCCTTAACAC CTGGTGGGAA AGTATTACTG AAAGAGAGCA GCAACTATCA 
TTAGTTTCTG TATTGCTGAT ATTGATAGCC ATTATTTACT GGGGCATATG GCAGCCGCTG
TCTATCGGGC TTGATAATAG TGAAAATCAA TTACAGCGAG CCCAGCAGAC CTTATCCACC
ACCCAACAGC GCGCAACTCT TTTAGTTAGC GCGGGTGTAG GACAAGGATC CGCTGTGAGT
GAAAACCAAA ATGTTACCCA GATAGTCACC ATCAGTGCGC AACAAAATGG TATTACTTTC
TCCCGTATTA TAAACCGCAA TGAACAAGTT GAAGTGCAGG TAAGTAATGT TGAATTTGAC
CGTTTCATTA ACTGGGTTTC CGTATTAAGC TCGCAATACT CAGTGTCGGT TCTCAATGCG
GATATATCTC GTGCAGATGA AGAAGGTTAT ATTAAAGTCA CTCGCCTTTC CCTTGGGTAT
TAA
 
Protein sequence
MVERLNTWWE SITEREQQLS LVSVLLILIA IIYWGIWQPL SIGLDNSENQ LQRAQQTLST 
TQQRATLLVS AGVGQGSAVS ENQNVTQIVT ISAQQNGITF SRIINRNEQV EVQVSNVEFD
RFINWVSVLS SQYSVSVLNA DISRADEEGY IKVTRLSLGY