| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_5050 |
|---|
| Symbol | |
|---|
| ID | 4612730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 5290522 |
|---|
| End bp | 5291520 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639794744 |
|---|
| Product | prephenate dehydrogenase |
|---|
| Protein accession | YP_941029 |
|---|
| Protein GI | 119871077 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0287] Prephenate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.546878 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCCG GCCCCGGTGC CGTGTGCCAA CCTGGAACGG TGACGAAACC ACCCGTGTGC
GTTTTGGGCC TGGGCCTCAT CGGCGGCTCG GTGATGCGCG CCGCCGCGGC CGCCGGGCGC
GAGGTGTTCG GGTACAACCG GTCGGTCGAG GGCGTCCAGG GTGCGCGCTT CGACGGTTTC
GACGCCAGCG AGCACCTCGA CGAGGTGCTC GGCCGCGCCG CCGAGACCTC GGCGCTGGTC
GTGCTGGCCG TGCCGGTGCC CGCCCTCGGA CTCATGCTGG GCCACATCCG CGACGCGGCG
CCGCAATGTC CGCTCACCGA TGTGACGAGC GTCAAAGGCG CTGTGCTGGA ACATGTTCGT
TCATTCGGCC TACAGGAGCG CTTCGTCGGC GGACACCCGA TGGCGGGCAC CGCGCACTCG
GGCTGGGCGG CCGGCGACGC GGCGCTGTTC GTCGGTGCGC CGTGGGTGAT CAGCGTCGAC
GACCACGTCG ACCCCGACGT GTGGGCACAC GTGATGACGC TCGCGCTGGA CTGCCACGCG
GTGGTGGTGC CGGCCCGCTC CGACGAACAC GACGCCGCCG CGGCCGGCAT CTCGCACCTG
CCGCACCTGC TCGCCGAGGC GCTGGCCGTC ACCGCGGGTG AGGTGCCGCT GGCGTTCGCG
CTGGCGGCCG GATCGTTCCG GGACGGCACC CGGGTGGCCG GGACGGCGCC CGATCTGGTG
CGGGCGATGT GCGAGGCGAA CTCGTCACAA CTCGTCCCGG CGCTGGACCG CAGCATCGAG
CTGCTCACCG CCGCGCGGGA GGCGCTGGCG CGACATGGTT CGGTGGCCGA CCTGGTCGAA
TCGGGCCACG CCGCCCGCAT GCGCTACGAC AGCTTCAGCC GCCCCGAGAT CATCACCACC
GTGATCGGCG AGGAGAACTG GCGCGACGAA CTGGCCGCCG CCGGCCGGGC CGGCGGGGTG
ATCAGATCCG CGCTGCCAAC CCGGGATAGT CGACGATGA
|
|---|
| Protein sequence | MASGPGAVCQ PGTVTKPPVC VLGLGLIGGS VMRAAAAAGR EVFGYNRSVE GVQGARFDGF
DASEHLDEVL GRAAETSALV VLAVPVPALG LMLGHIRDAA PQCPLTDVTS VKGAVLEHVR
SFGLQERFVG GHPMAGTAHS GWAAGDAALF VGAPWVISVD DHVDPDVWAH VMTLALDCHA
VVVPARSDEH DAAAAGISHL PHLLAEALAV TAGEVPLAFA LAAGSFRDGT RVAGTAPDLV
RAMCEANSSQ LVPALDRSIE LLTAAREALA RHGSVADLVE SGHAARMRYD SFSRPEIITT
VIGEENWRDE LAAAGRAGGV IRSALPTRDS RR
|
|---|
| |