Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_3416 |
Symbol | |
ID | 4611343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | + |
Start bp | 3582609 |
End bp | 3584978 |
Gene Length | 2370 bp |
Protein Length | 789 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639793089 |
Product | polysaccharide deacetylase |
Protein accession | YP_939400 |
Protein GI | 119869448 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCAGCC CCTTCAGAAG ACGCCCGGAC GCCATCCGCG GCACCGACCC TCTGACCGCC GCACCCGGTC CGGTGTTCTT CGACCGGACG GGAAAACGTC TGTACTACTT CGCCGCCGGT GTCATCGTGC TCGCGGTGAT CGTGGCAGTG CTGCCGGTCC GGGTGACCCC CATGGCCTTC GATCCGCTGT GGACCGTGCC GACCAACAGT GATTCGGGCT TCCCGCGTCG CGTGCTGTCC ACCGCCGACG ACCGGCGCTT TCCCGTTCTC GGCAGCGAGG ATGACGAGGT CCTCAGCAGG GTGGTCCGGG TCGACCGGCG GGGTGATCAG TGGAATCTCG TCGACCCGTT CACCAATCAG CTGTACCGGG TCGCCGACGA TGACGACAAG GATCGGATTC GCGACAGTGC CTACGCGATA GACCATTACG GCCGTCCGCC GGACCGCCAC CTGATGCTGA CATTCGACGA CGGACCCGAC GTCGAGTTCA CCACCCAGGT GCTCGACATC CTGTCCCGCG AGAAGATTCC CGCGACCTTC TTCGTCCTCG GCTCTCAGGT CGTCCTGCAT CCGGATGTCT TCCGGCGGAT GATCCGCGAG GGCCATATGG CCGGCAACCA CACGATGTTC CATGTCGACT TCGACGAGCA CACCGATTTC CGCAACCGGC AGGAGATCAT CGCCACCGAC CGCGTCATGC GCGCCACCGC GGCCTATGCC AGCAGACTCT TCCGGATCCC GCGAGGCGAC CCCGACAACA ACACGCTCGC GCTGCTGCAG TCACAGCAGC TCGGATACCT CCAGGTCGAC CAGGACATCG ACACCCTCGA CTGGAAGGTG TCGCCGGAGA ACGAGGTGGC GGTCCCACAA CTCGACGGGC GTGGACACGT CGTCCTCCTG CACGACGGTG GCGGCGACCG GTCAGCGACC GTCCGCATGC TCGAGCAACT GATCGCCGAG GCCAAGAGCA AGGGCTACAC CTTCTCGACG CTCGCACCGC TGCTGTCTGA GCAGGAGCTG CCCGTGAGCA ACGCCGAACA GTATCCGGCC GACGCCGCGA CGTACCACAC GCTGCGGCTG ATGGAGAAGG CGCCGGGAGC AGTGCTCGGG TTCCTGTTCT GGCTGGGCAT GGGCTCGCTG ACGGTGATGT CGTTGCTGTA CCTGATACTC GCGCTCGTCT GTCAATACCG GCAGAACCGG TTGCGCTGGA ACGACATCGG CGATGACCAG CTGCCGATGG TGAGCGTGGT GTTGGCCGCC TTCAACGAGG AGAAGGTGAT CGCGAGAACG ATTGCCGAAC TCCGCCGCAG CGACTACCCG CGGTCGAGGT TCGAGGTGGT CGCGGTCAAC GACGGGTCCA CGGACGGCAC CCTGCGGATC CTCACCGAAC TGGCGCGCGA CTGGCCCAAA TTGCGCGTGG TCGACCAGGC GAACAGCGGA AAATCGTCGG CGATCAACAA CGGGATCAAT CACGCGTCGG CGGTGTCGAC CGTGATGGTC ACGATGGACG CGGACACCCT CTTCAGACCG GACACGATCC GCAACCTCGC CCGGCACTTC GCCCGCCACA CCCACGGCAG ACAGGTCGGC GCGGTGGCCG GGCACATCAA GGTCGGCAAT CGGCGCAATC TCCTGACCGC CTGGCAGAGC CTCGAGTACA TCTCCGGAAT ATGCGTCACC CGTATGGCGG AGCGCCTGCT CAACGCGATC TCGATCGTCC CCGGCGCGTG CTCGGCGTGG AGCCGCACGG CCCTCGAGGA GATCGGCGGC TTCTGCGATG ACACCATGGC CGAGGACTGT GACGCGACCC TGGCGCTGCA GCGACGCGGT TACCGGATCC TGCAGGAGAA CAACGCCATC GCCGACACCG AGGCGCCGGA AACCATCCGT GCCCTTGCCA AACAACGCAA ACGGTGGACC TACGGCAACA TCCAGGCGCT GTGGAAGCAC CGCGCCATGC TGTTCCGGCC GCGCTACGGG GCACTGGGTC TGGTCGCGTT GCCCTACGCC GCGCTCTCGC TCATCGTGCC GCTGCTGTTC ATGCCGCTGA CGATCGTCGC GGCCGGGATG AGCCTCGCGG CCGGCAACTG GCAGAGCATC GCGCTGTTCG CGGGATTCGT TGCGGCACTG CACATGATCA TCTCGATCAC CGCTGTCGCG ATGGCCCGGG AACGCGCCTG GCATCTGCTC GTCGTCCCCG TCTACCGGAT CATCTACGAG CCGCTGCGGG CCTATCTGCT CTACGCCTCG GCCTATCGGG CCATCAAGGG CACCATCGTG GCCTGGGACA AGTTGGAACG CAGGAACACG GTGAGCGCCT TCGTCGAACG TCACCGCCCG ATGCCACCGA TCCTCGGGGC TCAGCAGTAG
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Protein sequence | MFSPFRRRPD AIRGTDPLTA APGPVFFDRT GKRLYYFAAG VIVLAVIVAV LPVRVTPMAF DPLWTVPTNS DSGFPRRVLS TADDRRFPVL GSEDDEVLSR VVRVDRRGDQ WNLVDPFTNQ LYRVADDDDK DRIRDSAYAI DHYGRPPDRH LMLTFDDGPD VEFTTQVLDI LSREKIPATF FVLGSQVVLH PDVFRRMIRE GHMAGNHTMF HVDFDEHTDF RNRQEIIATD RVMRATAAYA SRLFRIPRGD PDNNTLALLQ SQQLGYLQVD QDIDTLDWKV SPENEVAVPQ LDGRGHVVLL HDGGGDRSAT VRMLEQLIAE AKSKGYTFST LAPLLSEQEL PVSNAEQYPA DAATYHTLRL MEKAPGAVLG FLFWLGMGSL TVMSLLYLIL ALVCQYRQNR LRWNDIGDDQ LPMVSVVLAA FNEEKVIART IAELRRSDYP RSRFEVVAVN DGSTDGTLRI LTELARDWPK LRVVDQANSG KSSAINNGIN HASAVSTVMV TMDADTLFRP DTIRNLARHF ARHTHGRQVG AVAGHIKVGN RRNLLTAWQS LEYISGICVT RMAERLLNAI SIVPGACSAW SRTALEEIGG FCDDTMAEDC DATLALQRRG YRILQENNAI ADTEAPETIR ALAKQRKRWT YGNIQALWKH RAMLFRPRYG ALGLVALPYA ALSLIVPLLF MPLTIVAAGM SLAAGNWQSI ALFAGFVAAL HMIISITAVA MARERAWHLL VVPVYRIIYE PLRAYLLYAS AYRAIKGTIV AWDKLERRNT VSAFVERHRP MPPILGAQQ
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