Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_2013 |
Symbol | rimM |
ID | 4613579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | + |
Start bp | 2134340 |
End bp | 2134861 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639791679 |
Product | 16S rRNA-processing protein RimM |
Protein accession | YP_938002 |
Protein GI | 119868050 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.325457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTCG TAATCGGGCG GGTCGCCAAG GCGCACGGCG TCACCGGTGA ACTGGTCGTC GAGGTCCGCA CCGACGACCC CGACGCCCGG TTCGTGCCGG GCGCGCGGTT GCGCGGCCGG GCGCCCAGGG GTGGCGCCGA ACGTGCGTTC GTCGTCGAAT CCGTTCGCCC GCACGGCGGT CGGCTGCTGC TGCGCCTCGA CGGGGTGGCC GACCGGACCG CCGCCGACGC CCTGCGCGGG ACGGTGTTCC TCGTCGACAG CGCGGATCTG CCGCCCATCG AGGAGCCCGA CGAGTATTAC GACCACCAAC TCGAAGGGCT GCTCGTGCGG ACCGTCGACG GGGTGGACGT CGGCACGGTG GCCGAGGTGC TGCACACCGC GGCCGGCGAA CTGCTGTCGG TGAAGACGCC CGAGGGCGCC GAGATTCTCG TGCCGTTCGT CACCGCGATC GTGCCGCGGG TGTCACTGGC CGACGGCCTG GTGGAGATCG ATCCGCCCGA GGGTCTGCTG GACCTGGAGT GA
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Protein sequence | MDLVIGRVAK AHGVTGELVV EVRTDDPDAR FVPGARLRGR APRGGAERAF VVESVRPHGG RLLLRLDGVA DRTAADALRG TVFLVDSADL PPIEEPDEYY DHQLEGLLVR TVDGVDVGTV AEVLHTAAGE LLSVKTPEGA EILVPFVTAI VPRVSLADGL VEIDPPEGLL DLE
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