| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_1290 |
|---|
| Symbol | |
|---|
| ID | 4614303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 1386859 |
|---|
| End bp | 1387560 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639790965 |
|---|
| Product | restriction endonuclease |
|---|
| Protein accession | YP_937292 |
|---|
| Protein GI | 119867340 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1787] Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.708132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.357779 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTCGTC GGCGACACGT CGGCAGCCCG CCGTACGATC CGGCCGTGTC CCGCAGCAGT
CGCCTCAAGC TCTACGGGGC GCTGGGCGCC GCGTCGGGAC TGAGCGCCCA CCTGCTCGGC
TGGCCGCCCG GAACCGTCAT GGCCCTCGTC GTCGCGGTGC CACTGCTCAC CGCCGCCGCG
CCCCGGTTCG TGCTCGGCGC CATCTCGGGG GCCACCGCAT CATCAGCGCC CGAAGACGAG
ATGACGGGCA CGCAGTTCGA GGACCACATC GCGCACATCG CCCGGTCCTG CGGCGTCCCG
GTGATCATGA CCCCGCTGAC CGGCGACTGG GGGGTCGACC TCATCCTCGG CCGGCGCCCC
AATCGCGTCG CGGTGCAGTG CAAACGCCAA TCGCGGCCGG TCGGTACGAG CGCGGTGCAG
GAGGTCGTCG CCGGCGCGCC GATGCAGGAC TGCGTGCGCA CCATGGTGGT CACCAACAAC
GAATTCACCC CGGCGGCACG CAAACTCGCC GAACGCCACG GGTGCGAACT GGTCGGCCGT
CAGGAACTCC CTCGGCTCCG CTCGACCATC CGGCGCCTCA CCGAGGACGC CGATGTCAGC
GCAAGGCCTC GCGCACCGCA TCCACCGCGG CGTCGAGTTC CGCCCGGGAC ACCGTCAGCG
CCGGGCGGAA GCGCACCGAA TCCACCCCGC TCGCCAACAT GA
|
|---|
| Protein sequence | MCRRRHVGSP PYDPAVSRSS RLKLYGALGA ASGLSAHLLG WPPGTVMALV VAVPLLTAAA
PRFVLGAISG ATASSAPEDE MTGTQFEDHI AHIARSCGVP VIMTPLTGDW GVDLILGRRP
NRVAVQCKRQ SRPVGTSAVQ EVVAGAPMQD CVRTMVVTNN EFTPAARKLA ERHGCELVGR
QELPRLRSTI RRLTEDADVS ARPRAPHPPR RRVPPGTPSA PGGSAPNPPR SPT
|
|---|
| |