Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_0180 |
Symbol | |
ID | 4615409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | - |
Start bp | 194100 |
End bp | 197381 |
Gene Length | 3282 bp |
Protein Length | 1093 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639789856 |
Product | RND superfamily drug efflux protein |
Protein accession | YP_936188 |
Protein GI | 119866236 |
COG category | [R] General function prediction only |
COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCGCCT GGTGGGGTCG AAACGTATAC CGATATCGGT ACATCGTGAT CGGTGTCATG GTGGCGCTGT GCATCGGTGG CGGCATCTAC GGGATCAGTC TCGGTAACAA CGTCACGCAG AGCGGTTTCT ACGACGAGGG AAGCCAGTCG GTGCAGGCGT CGGTCGCCGG CGATGAGGTC TACGGCCGCG ACCGCACGAG CCACGTCGTC GCGATCCTGA CCCCGCCCGA CGGCGAGAAG GTCGACAACC CGGAGTGGCA GCGCGAGGTC GTCGGTGAGC TCGACGCTCT CGTCAAGGAC CATCCGGACC AGGTGGTGAG CTGGGTCGGC TGGCTACGGG CGCCCGACGC CGCCAGCGCC ACCGTGCAAC AGATGAAGAC CGAGGATCTG TCCAAGACCT TCGTCAGCGT CCCGCTCAAA GGCGACACCG ACGACGAGAT CCTGAAGAAC TACCAGGTCA TCGAACCCGA CCTGCAGGAG ATCAACGACG GCAACATCCA GCTGGCCGGC CTCAACCCGC TGGCCAGCGA ACTCACGGGC AGCATCGGTG AAGACCAGAA GCGGGCCGAG GTCGCCGCCA TCCCGCTGGT CTGCGTTGTG CTGTTCTTCG TTTTCGGCGG CGTGATCGCC GCGGCACTGC CCGGCCTCAT CGGCGGTCTC ACCATCGCGG GCGCGCTGGG CATCATGCGC CTGCTCGCCG AGATCATGCC CGTGCACTTC TTCGCCCAGC CGGTGGTGAC GCTCATGGGC CTGGGCATCG CCGTCGACTA CGGCTTGTTC ATGGTCAGCC GGTTCCGAGA AGAACTCGCC GAGGGCTACG ACACCGAGGC GGCGGTACGC CGCACGGTGA TGACCTCCGG CCGCACGATC ATGTTCTCCG CGGTCATCCT GGTCGCCTCG TCCGTCCCGC TGCTGTTGTT CCCGCAGGGC TTCCTGAAGT CGATCACCTA CGCGATCATC GCCTCGGTCA TGCTGGCGGC AGTCCTGTCG ATCACCGTCC TCGCCGCGGC ACTGGCGATT CTCGGCCCCA GGGTCGATGC GCTCGGCGTC AAGACACTCA TCAAGTTCGC CGAACCCGAT CCGATCTCCT CCGACCCGGC GGTCCAGAAG ACCAACACGT TCGCCATCGC CTCGATCCCG CTGGGGCTGC TGGTGCCGCC GGTGGGCATC GCGCTAGGCC ACATCGCCCG CAAGCGCATC AAGCAGACGG GTGAGCAGGG CGCCAACCTG GCCCTGATCG GACTGGTCCT CGGCTACACC GTGCTGTACG GCGCCATGGC CTACGGCGTC ATCGCGTTGA AGGACAACGG CACCATCGGC AGCGGCGTCT ACTGGATGTT GCTCGGAATC GTGGCCTTCC TCGTCATCGT CACCTTCGGC CTCACCCTGG CGCGGTATGT GCCGTTGGCG CGTCGCCCCA TCGTGTGGTG GCTGCACTGG TTGGCGGAGA AGACCCAGAA GACAAAGACC CGCGCCGAGG TCGAGCAGGG GTTCTGGGGC AAATTGGTCA CCCACGTGAT GAAGCGCCCC GGCACGTTCG CCTTCCCGAT CATCGTCGTG ATGATCCTGC TGATCATCCC GCTGGGCCAG TTGTCTCTCG GCGGCATCAG CGAGAAGTAC CTGCCGCCGG ACAACTCCGT CCGGCAGGCG CAGGAGGACT TCGACCGCAG CTTCCCCGGT TTCCGCACCG AACCGCTGAC GATCGTGCTC AAGAGCGACA ACGGTGACCC GGTCACCGAT CAGCAGGTGG CCGACATCCG CGCCAAGGCG ATGTCGATCA GCGGCTTCAT CGATCCCGAC AACGACCCGT CGAAGATGTG GCAGGAGCGG TCGGTCCAGG AAGGCGGCTC CGAGGATCCG TCGGTGCGGG TGATCCAGAA CGGTCTGGAG AACCGCAACG ACGCCGCGAC CAAGATCGAA GAGTTGCGAG CGTTGTCCCC ACCGCGCGGA GTCTCCGTGT GGGTCGGCGG TACGCCGGCG CTCGAGCAGG ACAGTATCCA CAGCCTGTTC GACCGGCTGC CGTTGATGGT CACGATCCTG ATCGTCACGA CGACGATCCT GATGTTCCTG GCGTTCGGGT CGCTCGTCCT GCCGATCAAG GCCGCGTTGA TGAGTGCCCT GACGTTGGGT TCGACGATGG GCATCCTGAC GTGGATGTTC GTCGACGGGC ACGGGTCCGG GCTGATGAAC TACACGCCGC AGCCCCTGAT GGCGCCGATG ATCGGCCTGA TCATCGCGGT CATCTGGGGT CTGTCCACCG ACTACGAGGT CTTCCTCGTC TCCCGAATGG TGGAGGCGCG CGCCCGCGGG CTGTCCACGG CGGAGGCCAT CCGGGTGGGC ACGGCCACCA CGGGACGGTT GATCACCGGT GCCGCGCTGG TGCTGGCCGT CGTCGCAGGC GCGTTCGTGT TCTCCGATCT GGTGATGATG AAGTACCTCG CGTTCGGCCT GCTGCTCGCG CTGTTGCTGG ACGCGACGAT CATCCGGATG TTCCTGGTGC CGGCGATCAT GAAGATGCTC GGCGACGACT GCTGGTGGGC GCCGCGCTGG ATGAAGCGTC TGCAGGAGCG CCTCGGCCTC GGCGAGGTCG AACTGCCGGA CGAGCGCAAA CGTCCGTTGG TGCGCGATCC CTCAGAAGAC CAGGCGCTGG TCGGCGCGGG CGCTCCGGTA CCGCCGCGGC CGCGGCCGCC GCACGATCCG ACGCACCCCG GTGTCGAGGG TCGCGTCGGA CCCACCCGTA TCCCTCCGGG CCCACCCCGG CTGAACGGTC CGTCGGTCGC CGGCACGAGC CGGATCCCGA CCAACCGGCC CGCCCCCGGG CACGAGCCTC CGACGACGCG GTTGTCGATG GCGAAGAACG CGGTGCGCGG TGCGGTCAAC ACCGCGACCA CTCCGCGGGC TCCGCGGCCG ACCGGCCCCG CACCCAAGCG CGAGGAACGC GAGATCGAGT CCTGGCTCGG TGAACTGCGT GGCGGCCCCG CTGGTCCCGG CGGCGGCCAA CCGCCCCGGC CGCCGCAGCC GTCGGCCGAA CCGACGACGG CCATGCGGGC CGGTGCGCCG AGGCCCGAAC CCGAGCCCGA AGGCAACGAG CCGACGACGG CGATCCCGGT GCAGCGCCCG CCGCAGCCCG AGGAGAGCGA CGCCACGACG AAGATCCCGA CCCAACAGGA TGCCGGGACC GATTCTGCGT CGACGGAGAA GCTCAACGCC CCTGAGGAGC AGAAGCGCCG CGGCGGTGGG ATGAGCGCAG CGGAGCTGCT GCGCCGCGAA GGCCGGATGT AG
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Protein sequence | MFAWWGRNVY RYRYIVIGVM VALCIGGGIY GISLGNNVTQ SGFYDEGSQS VQASVAGDEV YGRDRTSHVV AILTPPDGEK VDNPEWQREV VGELDALVKD HPDQVVSWVG WLRAPDAASA TVQQMKTEDL SKTFVSVPLK GDTDDEILKN YQVIEPDLQE INDGNIQLAG LNPLASELTG SIGEDQKRAE VAAIPLVCVV LFFVFGGVIA AALPGLIGGL TIAGALGIMR LLAEIMPVHF FAQPVVTLMG LGIAVDYGLF MVSRFREELA EGYDTEAAVR RTVMTSGRTI MFSAVILVAS SVPLLLFPQG FLKSITYAII ASVMLAAVLS ITVLAAALAI LGPRVDALGV KTLIKFAEPD PISSDPAVQK TNTFAIASIP LGLLVPPVGI ALGHIARKRI KQTGEQGANL ALIGLVLGYT VLYGAMAYGV IALKDNGTIG SGVYWMLLGI VAFLVIVTFG LTLARYVPLA RRPIVWWLHW LAEKTQKTKT RAEVEQGFWG KLVTHVMKRP GTFAFPIIVV MILLIIPLGQ LSLGGISEKY LPPDNSVRQA QEDFDRSFPG FRTEPLTIVL KSDNGDPVTD QQVADIRAKA MSISGFIDPD NDPSKMWQER SVQEGGSEDP SVRVIQNGLE NRNDAATKIE ELRALSPPRG VSVWVGGTPA LEQDSIHSLF DRLPLMVTIL IVTTTILMFL AFGSLVLPIK AALMSALTLG STMGILTWMF VDGHGSGLMN YTPQPLMAPM IGLIIAVIWG LSTDYEVFLV SRMVEARARG LSTAEAIRVG TATTGRLITG AALVLAVVAG AFVFSDLVMM KYLAFGLLLA LLLDATIIRM FLVPAIMKML GDDCWWAPRW MKRLQERLGL GEVELPDERK RPLVRDPSED QALVGAGAPV PPRPRPPHDP THPGVEGRVG PTRIPPGPPR LNGPSVAGTS RIPTNRPAPG HEPPTTRLSM AKNAVRGAVN TATTPRAPRP TGPAPKREER EIESWLGELR GGPAGPGGGQ PPRPPQPSAE PTTAMRAGAP RPEPEPEGNE PTTAIPVQRP PQPEESDATT KIPTQQDAGT DSASTEKLNA PEEQKRRGGG MSAAELLRRE GRM
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