Gene Pisl_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1998 
Symbol 
ID4617069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1814772 
End bp1815593 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content54% 
IMG OID639785089 
Productribulose-1,5-biphosphate synthetase 
Protein accessionYP_931488 
Protein GI119873481 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1635] Flavoprotein involved in thiazole biosynthesis 
TIGRFAM ID[TIGR00292] thiazole biosynthesis enzyme 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.310517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAGAT ATTTATCTAT ACCACATTTA TTACTTATGG AGTTAAAAAT CGCGAGGGCG 
ATAATAAAAC ATGGGCTTGA AGATTTGTAT GAATATAGCG ATGTAGATGT GGCTATAGTT
GGGGCAGGGC CTGCCGGCCT AACGGCCGCT AGATATCTCG CCGAGAGGGG GCACAAAGTT
GTGGTTTATG AGAGAAGGTT TTCCTTTGGC GGTGGGATTG GCCCAGGTGG GAACATGATT
CCGAAGATTG TGGTACAGGA GGAGGCGGTT CCCGTATTGA GAGATTTTAA AATTAGGTAC
AAGCCTGTGG GCGACGGCCT CTACACGGTG GACCCCGCCG AGTTGATTGC CAAGTTGGCC
GCCGGCGCTA TAGACGCCGG AGCGAAGATA ATCTTGGGAG TCCACGTAGA TGACGTGATC
TTCCGGGGCG ATCCGCCGAG GGTAGTTGGA TTGCTTTGGG TGTGGACGCC GATACAGATG
TCTGGCTCGC ACGTCGACCC GCTCTATACT CAGGCCAAGG CTGTCCTAGA TGCCACGGGT
CACGACGCCG AAGTCATCTC TATTGCGGCT AGAAAAGTGC CAGAGTTGGG CATAGAGGTG
AGAGGGGAGA AGTCCGCCTG GGCTGAGGTA TCTGAGAAGC TCGTGGTAGA ACACACCGGG
AGGGTGGCGC CTGGCCTCTA TGTGGCGGGC ATGGCGGTCT GTACAGTACA CGGCCTGCCG
AGAATGGGCC CCATCTTCGG CGGGATGCTC CTCTCCGGCA GAAGGGCGGC CGAGATAATA
CATAAGGATT TGGTAGAGGA GGTCTATGCC GTTCGAGCTT AA
 
Protein sequence
MKRYLSIPHL LLMELKIARA IIKHGLEDLY EYSDVDVAIV GAGPAGLTAA RYLAERGHKV 
VVYERRFSFG GGIGPGGNMI PKIVVQEEAV PVLRDFKIRY KPVGDGLYTV DPAELIAKLA
AGAIDAGAKI ILGVHVDDVI FRGDPPRVVG LLWVWTPIQM SGSHVDPLYT QAKAVLDATG
HDAEVISIAA RKVPELGIEV RGEKSAWAEV SEKLVVEHTG RVAPGLYVAG MAVCTVHGLP
RMGPIFGGML LSGRRAAEII HKDLVEEVYA VRA