| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1869 |
|---|
| Symbol | |
|---|
| ID | 4618143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 1691542 |
|---|
| End bp | 1692567 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639784957 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_931360 |
|---|
| Protein GI | 119873353 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1607] Acyl-CoA hydrolase |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.185423 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTAA TATCGTTTTT CTTCTGGCTT GTGGAGGTAT TTGTATCTAG GACTTTAGTA
GAATCCACCC GGTTGGTGTC GCAAAGACAT GTAAATCCAC TTGGTATGTT ATATGGCGGC
TATATGTTAC AGTGGGTTGT AGACGTCGGC AGTGTAGCGG CTATGAATTT CGCCGAGGGA
GATGTGGTAC TTGGGTTTTT AGACAGGATG CATTTTGTCA CCCCGGTGAG GGCCGGCGAT
TTATTAACTT TCAGAGGCTG GGTTGTAAAC GTCAGACGGA GTAGTATCTC TGTGTTAGTG
GAGTCTTATG TAAAGAGAGG GGGCGAGACT AACTTGGCTA CAGTAGGTAG AATGATATTT
GTAAAACTTG GGCCTGGAGG AGAGCCTGCG CCTGTGGGGA AGAGGGTGAT TTGCGACGTG
GGATGGGAGG AGTTGTGTAG TTACTTCCAG AGGTGGAGGT CTGATATAGA TGCGATAGTT
GAAGGGGAAG AGCCCGGCGT AGAGGGAGAT TGGCATTTAA CAAGTAGCTT CTTAGCAATG
CCTGAAGACT CTATCGATGG AGTCTTAATG TACGGCGGGA GACTTCTCTA TAGACTAGAC
GAGTTGGCGT TTATAGAGGC TTTTCAGTTT TACCCAGCTA TATATGTGAC AGCTAGCGTC
AACAGAATTG TCTTTAGAAG GCCTATCTAT GTTGGAGATA TTGTCTCTGT TAAAACAGGG
GTTACTCACG TTGGCTCTAC AAGTCTAGAA ATTGGCTTTG TAGTAGAGGC GTTTGGCCAG
AGGGGCCGAC GGAGAGTTGC CGACGGCTAC TTTACTTTTG TCAATATGTC CGAGGGGAAG
CCAAGCGAAA TTAGGGTCCC GCCTAGAGGC GACGAAGCCG CTAGAAGAAG GAAAGAGGAG
AGTGTGCAGG AGGCCAGGAT GTTGAAGGGG CTTAGACCGC CCGCCGGGGC GGAGCCGTGG
CTTCTTCAGC TGGCTAGGAG GTGGTTGAGG AGCTCCTCAA GCTCGTCTTT AAGGGCTGAG
GTGTAG
|
|---|
| Protein sequence | MVLISFFFWL VEVFVSRTLV ESTRLVSQRH VNPLGMLYGG YMLQWVVDVG SVAAMNFAEG
DVVLGFLDRM HFVTPVRAGD LLTFRGWVVN VRRSSISVLV ESYVKRGGET NLATVGRMIF
VKLGPGGEPA PVGKRVICDV GWEELCSYFQ RWRSDIDAIV EGEEPGVEGD WHLTSSFLAM
PEDSIDGVLM YGGRLLYRLD ELAFIEAFQF YPAIYVTASV NRIVFRRPIY VGDIVSVKTG
VTHVGSTSLE IGFVVEAFGQ RGRRRVADGY FTFVNMSEGK PSEIRVPPRG DEAARRRKEE
SVQEARMLKG LRPPAGAEPW LLQLARRWLR SSSSSSLRAE V
|
|---|
| |