Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1838 |
Symbol | |
ID | 4617151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 1667991 |
End bp | 1668353 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639784922 |
Product | putative transcriptional regulator |
Protein accession | YP_931329 |
Protein GI | 119873322 |
COG category | [K] Transcription |
COG ID | [COG2345] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.416866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.000363735 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGGCGTGA AGGATCCAAA GGCTATTATC CTTGAGATAT TAAAGAGGGA GGGGCCTGTC CCCGTCTATA GGTTGGCTAA GGCACTTGGC GTGTCTTATG GAGCTGTCCA GTGGTACATA TACACTCTAG AAAAGGAGGG GGTTGTCGAG ACTGTGAAAA TTGGAAAGAG GAGGTATGTG GTTCTCAAGG CGTCTGATTG GATGGGGAAT GTAAAAGTTG GTGATATTCT CGACGAGTTT CTTCTTACTC TCTCGGCGCT TGGAGTTAAG CCGGAGATGA CGCTTCGGGA GGCCCTAGAG ACCTTAGAAA AGAGGGCGCC TCACATCGCC GAGCTCCTCC GTAGGATGAT GGAGAAAATC TAG
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Protein sequence | MGVKDPKAII LEILKREGPV PVYRLAKALG VSYGAVQWYI YTLEKEGVVE TVKIGKRRYV VLKASDWMGN VKVGDILDEF LLTLSALGVK PEMTLREALE TLEKRAPHIA ELLRRMMEKI
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