Gene Pisl_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1838 
Symbol 
ID4617151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1667991 
End bp1668353 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content50% 
IMG OID639784922 
Productputative transcriptional regulator 
Protein accessionYP_931329 
Protein GI119873322 
COG category[K] Transcription 
COG ID[COG2345] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.416866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.000363735 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGGCGTGA AGGATCCAAA GGCTATTATC CTTGAGATAT TAAAGAGGGA GGGGCCTGTC 
CCCGTCTATA GGTTGGCTAA GGCACTTGGC GTGTCTTATG GAGCTGTCCA GTGGTACATA
TACACTCTAG AAAAGGAGGG GGTTGTCGAG ACTGTGAAAA TTGGAAAGAG GAGGTATGTG
GTTCTCAAGG CGTCTGATTG GATGGGGAAT GTAAAAGTTG GTGATATTCT CGACGAGTTT
CTTCTTACTC TCTCGGCGCT TGGAGTTAAG CCGGAGATGA CGCTTCGGGA GGCCCTAGAG
ACCTTAGAAA AGAGGGCGCC TCACATCGCC GAGCTCCTCC GTAGGATGAT GGAGAAAATC
TAG
 
Protein sequence
MGVKDPKAII LEILKREGPV PVYRLAKALG VSYGAVQWYI YTLEKEGVVE TVKIGKRRYV 
VLKASDWMGN VKVGDILDEF LLTLSALGVK PEMTLREALE TLEKRAPHIA ELLRRMMEKI