| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1837 |
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| Symbol | |
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| ID | 4617832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 1666666 |
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| End bp | 1667994 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639784921 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_931328 |
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| Protein GI | 119873321 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.409643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.000186783 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACATAA GCTTCCTAAG GAGGGAATTT GGCGACCGGT TTATAGAAGA TAAAGTTGTC
GCATCTCTAT ATATCCGCGA CGCCTCGTTT ATAGAGGTTT CTCAGTCTAT CATAGGGGTT
GTATTTCCAG AAGACGAAGA GGAGGTTGTA GAGCTAGTTC GTTGGGCAGT GAGAAATAAG
ACCCCATTAT TTCCACAGGG ATGCGCCACA AGTCTCTCTG GCAACGCCAT TGCGACAACA
CCCGGGCTGG TGGTCAGCTT CGAAAGGATG GCCAAGGTGG AGATAGACCC CATAGACGGC
GTGGCTGTGG CGGGGCCGGG GGTCAAGCTA GAGGAGCTTA ATATAGAACT GGCTAGACAC
GGCCTCTTCT TCCCAGTAGA CCCCGGCTCT GTCAAAAGCG CTACAGTAGG CGGGGCGATA
GCTAACGGCG CAGGCGGTAT GAGAGGCGCA AAATACGGCA CTATGAAAGA CTGGGTGTTA
GGCCTAAGGG TGGTGACGGG GCGGGGAGAT ACACTTAAGT TGGGCTGCCG GACGTATAAA
TGTAGAAATG GATACGACTT AGTTAGACTA TTTGTGGGGA GCGAGGGGAC TCTGGGCTTA
GTCACAGAGG CTACTCTCAA GCTAGCCCCC ATCCCCGAGT CAGCTACGGC AGTACTGGCG
TATTACAACG ACGTAGAAAC CCTAGTTGAA GACGTGGTAA AAGTCAGAGC CAACAGGGTG
TGGCCCCTAT TTGCCGAGTT TCTCGACGCG CCTACCTCTG CCCTAGTTGG GCTGGAAGAG
AAAAACGCCC TTTTCCTCGG CGTTGATGTA AACACAGGCG CCGAGGAGAG ACTACTTAAA
AAACTGAGAG AGCTTATCAG AGGCGAGATA GCACAGGAAG CCGCGGGGTG GGAAGCCGCC
ATGAAACTCC TAGAGCCAAG ACGTAAGCTT TTCTATGGCC AGATAACAGC CGCAAGAGGG
GGCGTGTTGG TGATAGAAGA CATAGCTGTC CCCATCTCGA AACTACCTGA CGCAGTCCGG
GGCCTTAAGG CCGTTGCCGC CAAACACGGC GTCCCCCTCC TTCTCGGCGG ACATGTGGGA
GACGGCAATT TACACCCAGC CACTTGGTAT AGGAGAGAGG AGGGCCCGGC GAAGGTGGAG
AAGTTTATAA AAGACATGGC AGAGCTTGTG GCTAAGCTAA ATGGCACAAT CTCTGCAGAA
CATGGCGTGG GGATCCTAAA GAAAGAGCTG GCGAGGGCTG AGCTAGGGGA GACAACGTTG
AGCTATATGA GAGAGCTCAA AAAGCTCTTC GACCCGTACA ATATCTTAAA CCCAGGCAAG
ATCTTCTAG
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| Protein sequence | MDISFLRREF GDRFIEDKVV ASLYIRDASF IEVSQSIIGV VFPEDEEEVV ELVRWAVRNK
TPLFPQGCAT SLSGNAIATT PGLVVSFERM AKVEIDPIDG VAVAGPGVKL EELNIELARH
GLFFPVDPGS VKSATVGGAI ANGAGGMRGA KYGTMKDWVL GLRVVTGRGD TLKLGCRTYK
CRNGYDLVRL FVGSEGTLGL VTEATLKLAP IPESATAVLA YYNDVETLVE DVVKVRANRV
WPLFAEFLDA PTSALVGLEE KNALFLGVDV NTGAEERLLK KLRELIRGEI AQEAAGWEAA
MKLLEPRRKL FYGQITAARG GVLVIEDIAV PISKLPDAVR GLKAVAAKHG VPLLLGGHVG
DGNLHPATWY RREEGPAKVE KFIKDMAELV AKLNGTISAE HGVGILKKEL ARAELGETTL
SYMRELKKLF DPYNILNPGK IF
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