Gene Pisl_1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1834 
Symbol 
ID4616921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1664476 
End bp1664844 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content49% 
IMG OID639784917 
ProductCopG family transcriptional regulator 
Protein accessionYP_931325 
Protein GI119873318 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0000112819 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAACGCT TTGGTATATC ACTACCAAAA GAAATGGCCG ACGCCATAGA TAAAATATCT 
AGAGAGACAG GGGCCACCAG AAGTGAAATC GTCGCCGCCG CCCTCCAAGA GTATCTAGAG
GCCAGGCGAA GCCACGCCGA GCCTGAACAC CAGTGTCTAG GCGTTGTAAT GGCGGTGACA
GACACCTTCT CAGAGATAGG CGACGTAATT GAGGATAACA AAACTCACAT AGTGGCCTAT
ACACATCTCC ATGTAGAAGG CCGTTGTCTC ACTATAGCTG TCGTAAAGGG GAGTAGCGAC
CAGATAGAAA AACTGACGCT AGAGGTTTCA AAAAGATCTA AACTCTCTCG CTACGTGCCG
CTACTGTGA
 
Protein sequence
MKRFGISLPK EMADAIDKIS RETGATRSEI VAAALQEYLE ARRSHAEPEH QCLGVVMAVT 
DTFSEIGDVI EDNKTHIVAY THLHVEGRCL TIAVVKGSSD QIEKLTLEVS KRSKLSRYVP
LL