| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1808 |
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| Symbol | |
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| ID | 4618339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 1640822 |
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| End bp | 1642249 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639784892 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_931300 |
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| Protein GI | 119873293 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02146] homocitrate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.787559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.000060507 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTATTTCC CTGTCTATGC ATTCGGGGAA AGAAGGCATC CGATAATTCT AGACTCGACA
CTTAGAGAGG GCGAACAAAC CCCCGGCGTT GTGTTCTCTG AGGAGTGGCG TATTAGAATT
GCAAAGGCGC TGTCTGATAT CGGCATCGGC ATGATAGAAG TCGGCGATCC CAACGTGGCC
CCTGATATAA AATCTGCAAT TAAAAAAATC ATAGAACTCA AAAAAGTCGG CGAGATAAAT
AGCGAAATTG TTGTCCATAG CAGAGCTGTA AAACAAGATA TTGAAACAGC TGCGTCTCTA
GAGCCAGACC GCATAGCGGT GTTCTATGGA GTAAGCGATA TACATCTGAA GTATAAACAT
AGAAAGACGC GAGAAGAGGC TCTCCAAATA ATTGCAGATA TGGTGTCTCT CGCCAAATCA
CACGGCGTCT CTGTCAGATT CACTGCAGAA GACGCCTCAA GAGCTGACTT GAACTATCTG
ATACAAGTAG TTAAAACTGC CTACGAGGCT GGGGCAGATA GAGTGAGTAT TGCAGACACA
GTGGGGGTCT TTACGCCGGA CCGCGCCAGA GAGGTTTTTA CAAAAATAAA AGCCGCAGTG
CCTGAGATAG GGCTAGATAT CCACGCCCAT AACGACTTTG GCATGGCTGT TGCCAACAGC
CTTGCGGCAG TTGAAGGCGG GGCAGACGTA GTACACACCA CTGTAAACGG CCTCGGAGAG
AGAGCCGGCA TTACGCCTCT TCAAGTTTTT GTCGCCGCCT ACTATTACCA CAAGGGCGTA
AGGCTTGTAA AACTTGAGAA ATTGCCAGAG ATCACCGCTA TGGTAGAGGC GGCAAGCGGC
ATTACTATTA TGCCCACCTT CCCCATAGTC GGCGAAAACG TATTTACACA TAAAGCCGGC
GTCCATCAAG CTGGCGTAAT CGCAAATCCC GAGACCTACG AGCCTATACC GCCTGAAGTC
GTTGGCAGAA CTCGCGACTT TTCTCTAGAT AAATATAGCG GGAGGAAGGC GATACAATAT
AGACTTGAAC GCATGGGAAT TTCGGTACCT CCAGAGGTGT TAGATAAAGT CGTGGAAGAG
GTCAAGCAGA TGAACGTGAG AAGACTTAGA GATGACGACT TATTAGAAAT TCTTGAGAAA
ATAACTAACA TGGCTTATAG AGCTAGAGTA AATAGACACA TTGAGGCATA TGTCTGGCTA
AAAGTTGCTA ATAACGTCTA TACGACATCT GTAGCACGTA GAGTGGCAGC GATAAAAAAC
GTCGCGTCTG TAGCCGAAGT TACAGGAGAT TATGATATAG TTGTAAAAGT TGTTGCAGAA
AATGTAGAGG AGCTAAACCA GATTATTGAA AACATAAGAG AGATCAAGGG CGTTGTATCT
ACTTTAACAA ATATCGTTTT GAAAGAACTC CCCATAAATA GCAAATAG
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| Protein sequence | MYFPVYAFGE RRHPIILDST LREGEQTPGV VFSEEWRIRI AKALSDIGIG MIEVGDPNVA
PDIKSAIKKI IELKKVGEIN SEIVVHSRAV KQDIETAASL EPDRIAVFYG VSDIHLKYKH
RKTREEALQI IADMVSLAKS HGVSVRFTAE DASRADLNYL IQVVKTAYEA GADRVSIADT
VGVFTPDRAR EVFTKIKAAV PEIGLDIHAH NDFGMAVANS LAAVEGGADV VHTTVNGLGE
RAGITPLQVF VAAYYYHKGV RLVKLEKLPE ITAMVEAASG ITIMPTFPIV GENVFTHKAG
VHQAGVIANP ETYEPIPPEV VGRTRDFSLD KYSGRKAIQY RLERMGISVP PEVLDKVVEE
VKQMNVRRLR DDDLLEILEK ITNMAYRARV NRHIEAYVWL KVANNVYTTS VARRVAAIKN
VASVAEVTGD YDIVVKVVAE NVEELNQIIE NIREIKGVVS TLTNIVLKEL PINSK
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