| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1792 |
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| Symbol | |
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| ID | 4617115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 1627841 |
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| End bp | 1628656 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639784876 |
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| Product | shikimate kinase |
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| Protein accession | YP_931284 |
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| Protein GI | 119873277 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1685] Archaeal shikimate kinase |
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| TIGRFAM ID | [TIGR01920] shikimate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.604666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCTGCG CCACTGGATG TGCCTACGGC GGGGGCACTA TAATTAATGC GATTGCCACA
GGCCACGGTG CGGCTTTCCC CATTTCGCTA AAGATATCTG CCAGAGTCTG TACGTCGGAT
AAGTTCGAGG TCTCCACTTA TGCAGACGTA GACATCTCGC CAGTGAAGCG GATAGTGGAG
AAGGTCGCAG AGAGATTCGG CCTTGGACCC CTCTCGGTAG AGATTTCCGG TGATCTCCCA
ACGGCGGGTG GGCTGAAGTC TAGTAGCGCC GTCGTAAACG CTATTATAAT TGCTACAACA
AAACTAGCGG GCGCCCGGCT GGACCTCTTC GACGTTGCGC GTCTAAACGC AGAGCTCAGC
AGGTGGGCTG GTATAAGCGT GACGGGCGCT TTTGACGACG CGGTGGCAAG CGCCACTGGG
CGTAGCTATT TGACCGATAA CTACAAGATG CTTGTGATTA GGGATCTGGA CGTGTCTGGG
AGGGCAGTTG TGTTAATCCC GCCGTATGAA AAGAGGAGGT ATAGACTAGA GGAGATGAGG
TCGCTCGCGC CGGTCATTAG AACTGCAGTG GCCTACGCGG GGTTGGGCAT GTGGAGAGAA
GCCATGTTGA TAAACGCAAT TGCATATGGC TACGCCCTGG GCTACCCCCC GGGGCCTACG
TTAGAAGCTT TAAGACTAGG CGCTGTCGGC GGCGTATCGG GTACTGGCCC CTCCCACGTC
TTTATTTCAG ACGAGCCCGA AAGACTTGCA GAAGTACTTG CTAAATATGG AAAAGTCTAC
GTAGTGGATA TACCCCAATC TGCTCCCCTT TGTTAG
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| Protein sequence | MVCATGCAYG GGTIINAIAT GHGAAFPISL KISARVCTSD KFEVSTYADV DISPVKRIVE
KVAERFGLGP LSVEISGDLP TAGGLKSSSA VVNAIIIATT KLAGARLDLF DVARLNAELS
RWAGISVTGA FDDAVASATG RSYLTDNYKM LVIRDLDVSG RAVVLIPPYE KRRYRLEEMR
SLAPVIRTAV AYAGLGMWRE AMLINAIAYG YALGYPPGPT LEALRLGAVG GVSGTGPSHV
FISDEPERLA EVLAKYGKVY VVDIPQSAPL C
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