Gene Pisl_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1788 
Symbol 
ID4617866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1624137 
End bp1624568 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content56% 
IMG OID639784872 
Productsignal transduction ATPase 
Protein accessionYP_931280 
Protein GI119873273 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTA GGGGGGTCAC GCTTATCTAT GGGCCGCCTG GCGCTGGGAA GACTACTCTT 
ACGGCGTGGT ACACGTATAA CAACTACGAT AGGGTGTTTT GGGTCTCTGC CTTTGAAGAT
GAGAGAACCT TTAGGAGGAA TATGGCGGCT TTGGGCTACA ACTTCGGCGA GAAGCTCGTC
TACTGGGAGG CGGTGTTGGC CGGAGCAGAG ACGTTTTTCA ACACCCTGTT AGACGCAGTA
GTTCGCGAAA AGCCGCAGGC CCTGGTAATA GACTCCGTGA CGGAGTTTCT CGCCGCGGGG
GGGGGGGGGG GGGCTGGACA TCCTCCACAA TGTTATTTAC AGAGCTATAA AACAGGGCGG
GGTCGACGTC TTTCTGACGG CGGAGAGGGA GGTTGCGCAG AGGGTGGCTT ATGTGGCGGA
CAACGTCATT GA
 
Protein sequence
MKLRGVTLIY GPPGAGKTTL TAWYTYNNYD RVFWVSAFED ERTFRRNMAA LGYNFGEKLV 
YWEAVLAGAE TFFNTLLDAV VREKPQALVI DSVTEFLAAG GGGGAGHPPQ CYLQSYKTGR
GRRLSDGGEG GCAEGGLCGG QRH