| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1763 |
|---|
| Symbol | |
|---|
| ID | 4617869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 1601461 |
|---|
| End bp | 1602558 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639784848 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_931256 |
|---|
| Protein GI | 119873249 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 86 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCT TTGGAAGAGA GTTCCGGATA ACCACCTTCG GCGAATCCCA CGGCAAGGCC
ATAGGCGTGG TGATAGACGG CGTGCCGGCT GGGCTGGAGC TGACGGAGGA AGACATCAAG
AGGGAGCTAG AGAGGAGGAT GTTCTGTCAC ATACCAGTCC TCAACCCGAG GTGCGAGCCG
GAGGAGGTGG AGATACTATC CGGCGTGAAG GAGGGCTACA CCCAGGGCAC CCCCATAGCC
GTCGTGATAT GGAACAGACG CGTCATCTCC AGCTACTACG AGGAGCTCTG GATGAAGCCC
AGGCCGGGCC ACGCCGACTT CGCCTACTAC CTCAAATACG GCAGATACTA CGACCACAGG
GGAGGAGGCA GAGCCTCCGG TAGAACAACT GCGGCGGTGG TAGCGGCGGG GGCAGTGGCC
AAGAAGATAC TCGCCCTAGC CGGCGCCGAG GTAGCCGGCC ACATAGTCGA GCTAGGCGGC
GTCGAGATAA ACGCCAGCTA CACCTACGAA GACGTCAAAA AAAGCTGGGA AAGGCCCCTC
CCCGTGGTAG ACCAACAAGC CCTAGACAAG ATGTTGGAAA AAATCCAAGA GGCGGCGGCA
AGAGGAGACA GCATAGGCGG CGGGGTGGAG GTCTGGGCCG TCGGGGTGCC GCCCGGCCTG
GGAGAACCCC ACTTCGGCAA GATAAAAGCC GACATAGCCG CCGCCGCCTT CTCCATACCA
GGCGCCATAG CGCTCGACTG GGGCATGGGC AGAGCACTGG CAAAGATGTG GGGAAGCGAG
GCCAACGACC CGATAACAGT CGCCAACGGC AGACCAACCC TCGCCACAAA CAAAATCGGC
GGCGTCCTCG GCGGAATAAC TGTGGGAACC CCCATATACT TCAGAGTCTG GTTCAAGCCC
ACCCCCTCCG TCAGAAAGCC ACAGCAGACC GTAGATCTAG CCAAGATGGA GCCGACGACG
ATAGAGTTCA AGGGGAGATA CGACGTGTCC ATAGTCCCCA AAGCCCTCGT AGCGCTAGAG
GCCATCACGG CGGTAACACT CGCCGACCAC CTACTCAGGG CAGGGCTCAT AAGAAGAGAC
AAGCCACTAG AGAAATAA
|
|---|
| Protein sequence | MNTFGREFRI TTFGESHGKA IGVVIDGVPA GLELTEEDIK RELERRMFCH IPVLNPRCEP
EEVEILSGVK EGYTQGTPIA VVIWNRRVIS SYYEELWMKP RPGHADFAYY LKYGRYYDHR
GGGRASGRTT AAVVAAGAVA KKILALAGAE VAGHIVELGG VEINASYTYE DVKKSWERPL
PVVDQQALDK MLEKIQEAAA RGDSIGGGVE VWAVGVPPGL GEPHFGKIKA DIAAAAFSIP
GAIALDWGMG RALAKMWGSE ANDPITVANG RPTLATNKIG GVLGGITVGT PIYFRVWFKP
TPSVRKPQQT VDLAKMEPTT IEFKGRYDVS IVPKALVALE AITAVTLADH LLRAGLIRRD
KPLEK
|
|---|
| |