| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1672 |
|---|
| Symbol | |
|---|
| ID | 4618112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 1517414 |
|---|
| End bp | 1518730 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639784755 |
|---|
| Product | isocitrate dehydrogenase, NADP-dependent |
|---|
| Protein accession | YP_931167 |
|---|
| Protein GI | 119873160 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0538] Isocitrate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.789911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.0375366 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTAG ATATTGAAAA AATCAAACGA GACATACCGA ATTTAGTACC CTACGCCGGG
AAATATGTAG ATCCACCAGA GGGAGACTAT GTAAAATACA CAGGGCCAGG CCAACTTAAG
GTTCCCGACA AGGTTATAAT AGGCTATATA GAAGGCGACG GTATAGGCCC CGAAGTAGCC
TACGCCGCAA TTAAGGTAGC AAACGCCGCT GTAGAAAAGG CGTATGGCAA ATCGAGAAAG
GTCGTGTGGT ACGAAGTTTT AGTTGGTGAA AAAGCAGAAA AAATACTTGG GAGTAGACTG
CCAGAGCAAA GCATAGAGGT GCTTAAAAAA ATAAGAGTCT TTCTTAAGGC GCCATTAGAG
ACTCCAGTAG GTGGAGGCTT CAGAAGTCTT AATGTCACAT TACGTCAATT GTTTGACCTA
TATGCGAACA TAAGACCTGT GAAGTACTTC CCCGGTCTCC CATCACCACT TAAAAAACCC
GAAGTTGACC TAGTGATTTT TAGAGAAAAT ACCGAAGATG TATATGCCGG TATCGAATGG
CCTTATAACA GCCCAGAGGC GGCTAAGCTT AGGGAATATC TAAAGAAAGA ATTTGGTATA
AATTTAAGAG ACGACGCAGG TATAGGCATA AAGCTTATAA GTAAATTCGG GACACAGAGA
ATTGCAAGAC TAGCGCTGAA ATTTGCAGTA GAAAACAAAA GACGAGTCGT AACTGTGATG
CACAAAGGAA ATATCCAGAA ATACACGGAG GGCGCCTTTA AAGAGTGGGC ATTTGAAGTA
GCGAGAAATG AGTTTAGAGA ATATGTAGTG TTTGAAGACG AACTTGCGCA ATACGGCGGC
CAAGTACCGC CTGGCAAAAT CTTGGTGAAT GACAGGATAG CAGACAACAT GTTACAACAG
CTCCTCACAC GGACAAGAGA ATACGACGTG ATACTTGCCC CAAATTTAAA CGGTGACTAC
GTATCTGACG AGGCGGCGGG GTTGGTAGGC GGCCTAGGCG TTGCACCAGG GATAGACGTA
GGCGACTGGG GCATGATGGC GGAACCTGTA CATGGAACTG CGCCAAAGTA TAGAGGCAAA
AACTATGTCA ATCCCACTGC CACAATTCTC GCACTTGAGC TCCTCTTTAG ATTTATTGGC
TGGAGAGAAG CTGCTGAATT AATTACAAAG GGTATTGAGA CGGCGTATAG GGAAGGTTAT
TTCACCGGCG ATCTGGCGAG ACAGTTAGAC GAAGAGGAAA GAAAACAAAG AGTTAAAGAG
GTACTAGGCA CACAAGAATT TGCAAACAAA GTGGTAGAGA TTATAAAAAG TCTATAA
|
|---|
| Protein sequence | MSVDIEKIKR DIPNLVPYAG KYVDPPEGDY VKYTGPGQLK VPDKVIIGYI EGDGIGPEVA
YAAIKVANAA VEKAYGKSRK VVWYEVLVGE KAEKILGSRL PEQSIEVLKK IRVFLKAPLE
TPVGGGFRSL NVTLRQLFDL YANIRPVKYF PGLPSPLKKP EVDLVIFREN TEDVYAGIEW
PYNSPEAAKL REYLKKEFGI NLRDDAGIGI KLISKFGTQR IARLALKFAV ENKRRVVTVM
HKGNIQKYTE GAFKEWAFEV ARNEFREYVV FEDELAQYGG QVPPGKILVN DRIADNMLQQ
LLTRTREYDV ILAPNLNGDY VSDEAAGLVG GLGVAPGIDV GDWGMMAEPV HGTAPKYRGK
NYVNPTATIL ALELLFRFIG WREAAELITK GIETAYREGY FTGDLARQLD EEERKQRVKE
VLGTQEFANK VVEIIKSL
|
|---|
| |