Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1659 |
Symbol | |
ID | 4617920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 1507443 |
End bp | 1508117 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639784742 |
Product | putative RNA methylase |
Protein accession | YP_931154 |
Protein GI | 119873147 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1041] Predicted DNA modification methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.69991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.00475931 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATTTGTG AAGTTGAGTT AAATCGCCGG TTTCTATGCC TATCTAAAGA GGAGGCTTTT GCACTTGCAG AACTGGGGAA ATGCGAAATA GTTAAATTAG ACGAGACAGT TGCAGTGTTC CAATGTGAGT CTTGTGATAT TTTCAATAGG GCGGCTTTGG TAAAATCGGT AAATGGCAGA AGGATAAGAA AAGAGAAGCC GAATATTGAA AGAAGCGTTA AAACACTGGA TTTTATAACA GCGCGTCTAA TGGTAAACTT AGCCCGCGTG ACGCCTAATA GTAGAGTATG GGAGCCTTTT GTCGGCACTG GCGCCATAGC ATATGAAATT GAAAGAGTAG GAGGTTATGT AATAGGAGGC GACATAGACG AGAAAATACT AAGAATTGCA CAACGTAATA TAAGGGGTGA CGTTGTGATT TGGGATGTGA CCTATCCTCC GCTTAGAGAG GTAGATGCTG CAGTAGGCGA TCCGCCATAT GGCCGTCTCT CTACATCAAT GATGGAGATA AGAGCGCTCT TATATATGTT TATAAGTGTC GCACCGCTTT ACATAAAAAG AAACGGCTAT ATAGTATTCG CATCGCCTAT ATATGTAGAC ATCCCGTTTC TTAAGAGTTG CACTATGTAT CTCCACGGTG GCCTTTATAG AGTTATATAC ATAGAGAGAG TTTAG
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Protein sequence | MICEVELNRR FLCLSKEEAF ALAELGKCEI VKLDETVAVF QCESCDIFNR AALVKSVNGR RIRKEKPNIE RSVKTLDFIT ARLMVNLARV TPNSRVWEPF VGTGAIAYEI ERVGGYVIGG DIDEKILRIA QRNIRGDVVI WDVTYPPLRE VDAAVGDPPY GRLSTSMMEI RALLYMFISV APLYIKRNGY IVFASPIYVD IPFLKSCTMY LHGGLYRVIY IERV
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