Gene Pisl_1659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1659 
Symbol 
ID4617920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1507443 
End bp1508117 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content42% 
IMG OID639784742 
Productputative RNA methylase 
Protein accessionYP_931154 
Protein GI119873147 
COG category[L] Replication, recombination and repair 
COG ID[COG1041] Predicted DNA modification methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.69991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00475931 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATTTGTG AAGTTGAGTT AAATCGCCGG TTTCTATGCC TATCTAAAGA GGAGGCTTTT 
GCACTTGCAG AACTGGGGAA ATGCGAAATA GTTAAATTAG ACGAGACAGT TGCAGTGTTC
CAATGTGAGT CTTGTGATAT TTTCAATAGG GCGGCTTTGG TAAAATCGGT AAATGGCAGA
AGGATAAGAA AAGAGAAGCC GAATATTGAA AGAAGCGTTA AAACACTGGA TTTTATAACA
GCGCGTCTAA TGGTAAACTT AGCCCGCGTG ACGCCTAATA GTAGAGTATG GGAGCCTTTT
GTCGGCACTG GCGCCATAGC ATATGAAATT GAAAGAGTAG GAGGTTATGT AATAGGAGGC
GACATAGACG AGAAAATACT AAGAATTGCA CAACGTAATA TAAGGGGTGA CGTTGTGATT
TGGGATGTGA CCTATCCTCC GCTTAGAGAG GTAGATGCTG CAGTAGGCGA TCCGCCATAT
GGCCGTCTCT CTACATCAAT GATGGAGATA AGAGCGCTCT TATATATGTT TATAAGTGTC
GCACCGCTTT ACATAAAAAG AAACGGCTAT ATAGTATTCG CATCGCCTAT ATATGTAGAC
ATCCCGTTTC TTAAGAGTTG CACTATGTAT CTCCACGGTG GCCTTTATAG AGTTATATAC
ATAGAGAGAG TTTAG
 
Protein sequence
MICEVELNRR FLCLSKEEAF ALAELGKCEI VKLDETVAVF QCESCDIFNR AALVKSVNGR 
RIRKEKPNIE RSVKTLDFIT ARLMVNLARV TPNSRVWEPF VGTGAIAYEI ERVGGYVIGG
DIDEKILRIA QRNIRGDVVI WDVTYPPLRE VDAAVGDPPY GRLSTSMMEI RALLYMFISV
APLYIKRNGY IVFASPIYVD IPFLKSCTMY LHGGLYRVIY IERV