Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1655 |
Symbol | |
ID | 4618129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1504675 |
End bp | 1505430 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639784738 |
Product | XRE family transcriptional regulator |
Protein accession | YP_931150 |
Protein GI | 119873143 |
COG category | [K] Transcription |
COG ID | [COG1395] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.00837967 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAATAAAC TCGTGGAGGC AACTCTTAAC ATTGTTAGAA ATATGGGAGA GTCTCTATTC GTAGATCTTT CTAAGCCATA CGCCTATACC CTCGTGGCGA AGTTCGGTAA TCAGAAATTC CTGATGCGTA TCGCCTCAGA CGCTGAAAAC ATATCAACAA GCGCAGTTCG TGACCTAAAA ATACTAAGCG CGTATACAGA TGCGATAAGT ATATGCATAG TCTCAAGCGT AAGGGGACAG ATACTTCAGA GGGGAACTGT GTATCTTAGG GATAACGTTA AGTTTATCTC TTTGTCTACT TTTGCCGATG CACTAAGAGG GAAGGGGCCG GTTTTTAAAT TCAACCGTGG GATGTTTACC GCAGTTATAG ATGGGGAGAA TCTAAGGAGG AAGAGAGAGG AAAGAGGCAT GAGCTTAGGA GTCTTGGCAG ATAGATTAGG AGTAACTCGC GAAACTGTGT ATCGCTACGA GAGGGGGGAG ATAGAGACGC CTTTAAGGGT AGCGCAGAAA CTTATTGAAA TGTTCGGAGA AGACGTAGTA CGCAAATTCG ATATAAATGA AAAACCGGCT ATAAACCAAG ATGAGATTAG AAACAGAGAG ATCGTAAGAA ACACCTATAG ACTGCTGGAG AGCCATCCAG ATGCCATTAG AGCAAGCGAT CGTACATTAC TTGTGTCTAG GAATAAAGAC AGAAGAGAAT ATGAGAAGAC CGTAGAGTTG GCAAACGCGC TTAACGTAGA GGTAGAAAAT TTGTGA
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Protein sequence | MNKLVEATLN IVRNMGESLF VDLSKPYAYT LVAKFGNQKF LMRIASDAEN ISTSAVRDLK ILSAYTDAIS ICIVSSVRGQ ILQRGTVYLR DNVKFISLST FADALRGKGP VFKFNRGMFT AVIDGENLRR KREERGMSLG VLADRLGVTR ETVYRYERGE IETPLRVAQK LIEMFGEDVV RKFDINEKPA INQDEIRNRE IVRNTYRLLE SHPDAIRASD RTLLVSRNKD RREYEKTVEL ANALNVEVEN L
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