Gene Pisl_1655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1655 
Symbol 
ID4618129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1504675 
End bp1505430 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content43% 
IMG OID639784738 
ProductXRE family transcriptional regulator 
Protein accessionYP_931150 
Protein GI119873143 
COG category[K] Transcription 
COG ID[COG1395] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00837967 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAATAAAC TCGTGGAGGC AACTCTTAAC ATTGTTAGAA ATATGGGAGA GTCTCTATTC 
GTAGATCTTT CTAAGCCATA CGCCTATACC CTCGTGGCGA AGTTCGGTAA TCAGAAATTC
CTGATGCGTA TCGCCTCAGA CGCTGAAAAC ATATCAACAA GCGCAGTTCG TGACCTAAAA
ATACTAAGCG CGTATACAGA TGCGATAAGT ATATGCATAG TCTCAAGCGT AAGGGGACAG
ATACTTCAGA GGGGAACTGT GTATCTTAGG GATAACGTTA AGTTTATCTC TTTGTCTACT
TTTGCCGATG CACTAAGAGG GAAGGGGCCG GTTTTTAAAT TCAACCGTGG GATGTTTACC
GCAGTTATAG ATGGGGAGAA TCTAAGGAGG AAGAGAGAGG AAAGAGGCAT GAGCTTAGGA
GTCTTGGCAG ATAGATTAGG AGTAACTCGC GAAACTGTGT ATCGCTACGA GAGGGGGGAG
ATAGAGACGC CTTTAAGGGT AGCGCAGAAA CTTATTGAAA TGTTCGGAGA AGACGTAGTA
CGCAAATTCG ATATAAATGA AAAACCGGCT ATAAACCAAG ATGAGATTAG AAACAGAGAG
ATCGTAAGAA ACACCTATAG ACTGCTGGAG AGCCATCCAG ATGCCATTAG AGCAAGCGAT
CGTACATTAC TTGTGTCTAG GAATAAAGAC AGAAGAGAAT ATGAGAAGAC CGTAGAGTTG
GCAAACGCGC TTAACGTAGA GGTAGAAAAT TTGTGA
 
Protein sequence
MNKLVEATLN IVRNMGESLF VDLSKPYAYT LVAKFGNQKF LMRIASDAEN ISTSAVRDLK 
ILSAYTDAIS ICIVSSVRGQ ILQRGTVYLR DNVKFISLST FADALRGKGP VFKFNRGMFT
AVIDGENLRR KREERGMSLG VLADRLGVTR ETVYRYERGE IETPLRVAQK LIEMFGEDVV
RKFDINEKPA INQDEIRNRE IVRNTYRLLE SHPDAIRASD RTLLVSRNKD RREYEKTVEL
ANALNVEVEN L