Gene Pisl_1634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1634 
Symbol 
ID4617860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1482534 
End bp1483742 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content47% 
IMG OID639784717 
ProductNADH dehydrogenase subunit D 
Protein accessionYP_931129 
Protein GI119873122 
COG category[C] Energy production and conversion 
COG ID[COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAGT CAGAGGAGTA CGGACTTATT TTAAAAGAAG AGAAGTTAGA AGGCGGCCGC 
CGCATTTTAG ATATTTTCTG GGGTCCGCAA CACCCCTCTT CGGGACATAC CAGGTTTATA
GTAGAGGTTG ACGGAGATAT AGTTGTAAAC GTCACGCCTG ACCCAGGCTA TGTTCATCGC
ACTATGGAGA AGCTGGGCGA GACAAGACAT TGGATACAGA ACATCCCCCT ATTTGAAAGA
CTTTCATTAC CAGATGCAAT AAATGTAACG TGGGCGTATG CAATTGCAAT AGAGAAGTTG
ACTAAATATG ACGTATCGCC CAGGGCGCAA TATCTCCGGG TTATAATGGG GGAGTTAAGC
CGTATCTCAA CACATCTATA CGACCTGGGT ATTCACTCTA TTATGATAGG GTCTTCCACC
GGGTTTATGT GGTGTTTCGG TCTCCGCGAG CTGTTGGTAC AGCTGTGGGC TATGGTGACG
GGCTCTAGGA CAACGCCAAC TTGGGTACTG CCTGGCGGCG TGAGAACAGC TCCTCCAGAC
GCCTTTTATG AACAGACAAA GGGCTTTCTT AACTATTTAG AGAAGAAATT AGATGAGTTT
ATTAGACTTG TTATTAAGAA CCCTGTCGGC TACTATAGGC TTAAAGACGT CGGCTACTTA
AGCAAAGAAG ATGCGGCAAA GCTCATGGCC ACTGGGCCGG GCGCCAGAGG CTCTGGCATT
GAATGGGATG CCCGTAAGAC GTATAGATAC GGGCTTTATG ACGAATTCGA ATGGGAGGTT
TGCGTAGAGG ACGGAGGAGA TTCGCTTGCT AGGACTTTAG TAAGAATCTG TGAGATAAAA
CAAAGTGCAA GAATAATAAG ACAAGCCATA GACAGGACTC CAAGAGATGG GCCACTGGTA
GGAGAGTCTC TTTTACATAG AATACCGCCG AAACAAAGAG AAAAAGCAAA TGAATATATC
AGGTTAGGGG CGCTGTTTAC TACAATGCTT CCACAAGGCG AGGGAGTTGG GATAACAGAG
GGTGGCCGCG GCCGTTACTT TTTCCACGTC TTTGGCGATG GGACAGAAAA GCCATATAGA
GTTAGGATAT CTACACCATC TTGGCAAAAC CTTCGCCCAA TGATAAAGGC TTTTATTGGC
GCACGGCTTA TGGATCTTCC AGCAATATAC GGCTCTTTTG GATACTTTCC GCCGGAGCAA
GACAGGTAA
 
Protein sequence
MIKSEEYGLI LKEEKLEGGR RILDIFWGPQ HPSSGHTRFI VEVDGDIVVN VTPDPGYVHR 
TMEKLGETRH WIQNIPLFER LSLPDAINVT WAYAIAIEKL TKYDVSPRAQ YLRVIMGELS
RISTHLYDLG IHSIMIGSST GFMWCFGLRE LLVQLWAMVT GSRTTPTWVL PGGVRTAPPD
AFYEQTKGFL NYLEKKLDEF IRLVIKNPVG YYRLKDVGYL SKEDAAKLMA TGPGARGSGI
EWDARKTYRY GLYDEFEWEV CVEDGGDSLA RTLVRICEIK QSARIIRQAI DRTPRDGPLV
GESLLHRIPP KQREKANEYI RLGALFTTML PQGEGVGITE GGRGRYFFHV FGDGTEKPYR
VRISTPSWQN LRPMIKAFIG ARLMDLPAIY GSFGYFPPEQ DR