Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1604 |
Symbol | |
ID | 4618250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 1457992 |
End bp | 1458714 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639784689 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_931101 |
Protein GI | 119873094 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.60148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATACT ATATAACGGC TTTAGTTGCC CTATTTATAC TATGGCAAAT TTTGGCGTAT GTGATAAACA AGCCATATCT CCCTCTGTTT ACAGACGTGG TGATATATAT GGCGGAGGAT GCACAGATAT TGTTAAGAAA CCTCGTTGCA ACATTGGCTA GGGTCTTTAT ATCGGTAGCA ATAGCGCTTG TTATAGGTTT TGTGGGGGGT CTTGCCGCTA CATGGCTTTC TGAGAGAGTA AGCGCAAATC TATTAAGAGC CGCCATACTT CTCACATATC CAATACCCCA CGTTGCGCTA CTCCCAATAT TACTACACCT CTTTGGTATT GAGACAAGTA AAATTGTACT TATGTCACTA ATAGCGTTTT ACCCCATTGC GCTTTCAGTA ATGGAGTGGA CGCAGAGATT TCCACGTGAC CTAGCCACGT TGATACATAT AATGGGGGGT GGTCGACGCG ATATAGTTAA ATATGTCGTT ATGCCATCTG CGTTACCAGG CATATTGACT GGTCTTAAAA TTGCGTTTAA TACAGCATAT TCGGTTTCTT TTATAGCCGA AAGTCTTGCC TTAACCGACG GGCTCGGGGC CTTGATCTAC GACAGTTGGC ATAGGCTTGA CTATCTACAA ATGTATGCAG CAATTTTGAC GCTAAGCGGC GCCGGTGTAG CCACATATGC TCTTATGTCG TTGCTAGAGA GGAAATTAAT AAAATGGGCT TGA
|
Protein sequence | MKYYITALVA LFILWQILAY VINKPYLPLF TDVVIYMAED AQILLRNLVA TLARVFISVA IALVIGFVGG LAATWLSERV SANLLRAAIL LTYPIPHVAL LPILLHLFGI ETSKIVLMSL IAFYPIALSV MEWTQRFPRD LATLIHIMGG GRRDIVKYVV MPSALPGILT GLKIAFNTAY SVSFIAESLA LTDGLGALIY DSWHRLDYLQ MYAAILTLSG AGVATYALMS LLERKLIKWA
|
| |