Gene Pisl_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1604 
Symbol 
ID4618250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1457992 
End bp1458714 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content43% 
IMG OID639784689 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_931101 
Protein GI119873094 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.60148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACT ATATAACGGC TTTAGTTGCC CTATTTATAC TATGGCAAAT TTTGGCGTAT 
GTGATAAACA AGCCATATCT CCCTCTGTTT ACAGACGTGG TGATATATAT GGCGGAGGAT
GCACAGATAT TGTTAAGAAA CCTCGTTGCA ACATTGGCTA GGGTCTTTAT ATCGGTAGCA
ATAGCGCTTG TTATAGGTTT TGTGGGGGGT CTTGCCGCTA CATGGCTTTC TGAGAGAGTA
AGCGCAAATC TATTAAGAGC CGCCATACTT CTCACATATC CAATACCCCA CGTTGCGCTA
CTCCCAATAT TACTACACCT CTTTGGTATT GAGACAAGTA AAATTGTACT TATGTCACTA
ATAGCGTTTT ACCCCATTGC GCTTTCAGTA ATGGAGTGGA CGCAGAGATT TCCACGTGAC
CTAGCCACGT TGATACATAT AATGGGGGGT GGTCGACGCG ATATAGTTAA ATATGTCGTT
ATGCCATCTG CGTTACCAGG CATATTGACT GGTCTTAAAA TTGCGTTTAA TACAGCATAT
TCGGTTTCTT TTATAGCCGA AAGTCTTGCC TTAACCGACG GGCTCGGGGC CTTGATCTAC
GACAGTTGGC ATAGGCTTGA CTATCTACAA ATGTATGCAG CAATTTTGAC GCTAAGCGGC
GCCGGTGTAG CCACATATGC TCTTATGTCG TTGCTAGAGA GGAAATTAAT AAAATGGGCT
TGA
 
Protein sequence
MKYYITALVA LFILWQILAY VINKPYLPLF TDVVIYMAED AQILLRNLVA TLARVFISVA 
IALVIGFVGG LAATWLSERV SANLLRAAIL LTYPIPHVAL LPILLHLFGI ETSKIVLMSL
IAFYPIALSV MEWTQRFPRD LATLIHIMGG GRRDIVKYVV MPSALPGILT GLKIAFNTAY
SVSFIAESLA LTDGLGALIY DSWHRLDYLQ MYAAILTLSG AGVATYALMS LLERKLIKWA