Gene Pisl_1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1592 
Symbol 
ID4617858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1448292 
End bp1449497 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content46% 
IMG OID639784676 
Productamidase 
Protein accessionYP_931089 
Protein GI119873082 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA TTGAAAAGAA GATAGAAGAG GCTAAGAGAC ATGCCGATTT AAACTATTTC 
CTTTACCTAA ATGAGAAAGT TGTTGAAGAG GTGGAATTTC TTAAGCGGGC TGGGAGGTGT
GGGGCGCTGT GTGGCATGAC GCTTGCGGTA AAAGACAACA TAGAAGTTAT GGGCATGCCT
ATTACAAACG GAGCGCCATA TATGAAGAAA ATATCTGATA AAACAGCGGC AGTCGTAAGA
CGTCTTATGG CAGAAGGCGC GGTTGTGCTA GGGAAAACAA ACATGCACGA GCTCGCCCTT
GGCGTTACGA ATATAAACCC CCATTTTGGG CCGACGCGAA ATCCCCACGA CCCCTCTCGA
ATAACTGGCG GATCTAGTGG AGGTAGTGCA GGCGCTGTTG CCATAGGCGT AGCAGACCTA
GGCATTGGCA CAGATACAGG CGGCTCAGTT AGAATACCAG CTGCGCTATG CGGTGTTGTC
GGATACAAGC CGCCCTATGG AAAAATTCCG ATGGACGGCA TATACCCCCT TTCACAAAGT
TTAGACCACG TCGGTTTTAT TGCAAGAAGT GTAAAAGAAC TTGTAAATAT ACTATCGGCT
GTGGGATGGG CACCTCGAGA TCTCTCGCCG CCTAAGAGAT TTAGATTTGC GGTACTAATG
GGTATTACAG AACCTTCTAG ATATGTAGAG AAGGCATTTT GGAAAGCTGT AGAGGTTTTA
GAGAATATAG GAGGTTTTAG AGATGAAGTT TTTCTAGACT CTACTAAATA TTCGGCTGCT
AGAGCTGCGT TATTGCTATC CGAAGCCGCC GCCAACTACT ATGACTATTT GAGAAGCGTA
GGCGAACATA TGGGCCGCGA CGTGGCGACT TTATTAGGTG TCGGCGTTGC TCTTCCCTCA
GTTGCTTACA TAGTTGCAAA GAGGATAAAA GAGGAAGCCA CACAATACTT CAATATACTA
TTTAAAAAAT ACGATGTAGT AGTTACGCCA ACCACAGCCA TAGAGGCTGT ACCTATAGAA
CAAGCTGATA GTATTACAAT GAGACGTAAA CTACTCGCGT ATACGGAGAT TTTTAACCTA
ACAGGCCATC CGGCTATTTC AGTACCGGCG CCAGCCACTT CCAGCCTTCC TGTGGGCCTT
CAAGTGGCGG CTAGAGACGA AGATACTTTA CTAGCAATAG CCGAAGCTTA CGAAGCGGCT
CTCTGA
 
Protein sequence
MSEIEKKIEE AKRHADLNYF LYLNEKVVEE VEFLKRAGRC GALCGMTLAV KDNIEVMGMP 
ITNGAPYMKK ISDKTAAVVR RLMAEGAVVL GKTNMHELAL GVTNINPHFG PTRNPHDPSR
ITGGSSGGSA GAVAIGVADL GIGTDTGGSV RIPAALCGVV GYKPPYGKIP MDGIYPLSQS
LDHVGFIARS VKELVNILSA VGWAPRDLSP PKRFRFAVLM GITEPSRYVE KAFWKAVEVL
ENIGGFRDEV FLDSTKYSAA RAALLLSEAA ANYYDYLRSV GEHMGRDVAT LLGVGVALPS
VAYIVAKRIK EEATQYFNIL FKKYDVVVTP TTAIEAVPIE QADSITMRRK LLAYTEIFNL
TGHPAISVPA PATSSLPVGL QVAARDEDTL LAIAEAYEAA L