Gene Pisl_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1540 
Symbol 
ID4616399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1403392 
End bp1403766 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content64% 
IMG OID639784623 
ProductpaREP9 
Protein accessionYP_931038 
Protein GI119873031 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.552044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGGTG TGTATCTCTA CTTCGGCCGT GTGAGGGTTG GGCCTCTCGT GGGGTACCTG 
TGGCTTTTGG GCAGGCGGCT TTATCTGAAG CGTAGTTGGC GCCCTCGGGA CACTGTCTAC
CTCGGCTCTG TGGACGATCT TCTTGGCGTC GCCGTGAGGG TTAGGCGGCT CGTCCCGAGG
CCCCTCCCCG TTAGGCAACT CGTGGCTGCG TTGGTGGACG CCCTCAGGAA GGCCTACTAC
GTCGCCAGCC GCTGCCGGGA CTCGCCGCGT TGGAAGATAC GCGCCTGGGA GGCGGCAATA
GCCATTGAGT ACGCCGCCAC CGCCCTCGCA ATGTACTGGC CAAGCGCCGC CAAAAAGATA
CTAGACGGCG GCTAG
 
Protein sequence
MAGVYLYFGR VRVGPLVGYL WLLGRRLYLK RSWRPRDTVY LGSVDDLLGV AVRVRRLVPR 
PLPVRQLVAA LVDALRKAYY VASRCRDSPR WKIRAWEAAI AIEYAATALA MYWPSAAKKI
LDGG