Gene Pisl_1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1510 
Symbol 
ID4616425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1377559 
End bp1378833 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content55% 
IMG OID639784593 
Producttype I phosphodiesterase/nucleotide pyrophosphatase 
Protein accessionYP_931009 
Protein GI119873002 
COG category[S] Function unknown 
COG ID[COG3379] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000184999 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.571853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATAAGC TGTTCATACT AGCCCTAGAC GGAGTGCCCT ACGAGGCCTT TATAAAACTG 
AGAGACCAAC TACCAAACCT CGCAGAAATT GCAGACAGAG GTAGCTGGGG CGTAATGAGG
GCAGTCGACC CGCCAATCAC AGTGCCGGCG TGGGCCTCCA TGTTCACGGG AAAAGACCCC
GGGGAACTCG GCATATACGG CTTTAGACAC ATGAGACGCC ACTCCTACGA CACGTACATA
GTAACGTCGG TCGACCTAAG AGAGAAATAT GTATGGGAAA GGAGGGGGCT TAGGTCAGTT
GTGATAGGCC TGCCGCCGGG CTACCCGCCG AGACAATACG GCATTTGGAT AAGCGACTTC
CTAACCCCAA AGGGCCGCCC CTGGACACAT CCACCGCAAC TAGCCGAAGA AATCGGCCAC
TACATCTTCG ACATAGAATA CCGCACAGAT AGAAAAGAGG AGGCCTACAG ACAGCTAGCC
GAGATGACCC ACGCCAGGTT CAGAGTAGCC CAAAAGCTAC TGGAAAAGGA GTGGGACGTC
TTCGTCCTCC ACGAAATAGG CACAGACAGA GCCCACCACC TCTTCCAGAA GTACTGGGAC
CCCCAACACC CCAAATACGC CCCAGACAGC CCCCACGCCG ACAAAATACC CACGTACTAC
CAGCTCGTAG ACCAGCTAGC CGGCCAGCTA ATAAAGAGGC TACCCCCAGA CACCCAGATA
CTAGCCATAT CAGACCACGG AAACCAAGCA CAACGCGGAG TCCTAGCGAT AAACCAGCTA
CTGAGGGAGT GGGGCCTCGT AGAATACGAA GAGAAGCCAG GAGAAGACAT AGAGAAGGTA
GTCAACTGGC GGAGGACAAA AGCCGTGGCG TGGGGCGGCT ACTACGCCAG GATATACATA
AACACCAGAG ACAGACCCCA GGGGACGGTG GATCCAGAAG AGGCAGAAGA CATAAAGAAA
GAACTAAAAA AGAAGCTAAG GACTCTCAAG GCCCCCTGGG GCTACATAGA AAACCAGATA
TATGAGCCGC GTCAGCTATA CCGAAAAGCC ACAGGCGACT ACCCAGACCT GGTGGTGTAC
CTCGACGAGG TGCGCGTCCG GCCAGTCCAG ACCATCGGAC ACCCAGACCC CTGGCTCCCA
GAAAACGACA GGGGCCCAGA CGACTCCCTA CACAGCTTCA ACGGCTTCTA CGCAGCCACC
TGGGGAGACG CCAAGAAAAA AGACATCCAC GCCCTAGACG TAGCGCAATA CATAGAAGCC
CTATGGAGTG CCTAG
 
Protein sequence
MDKLFILALD GVPYEAFIKL RDQLPNLAEI ADRGSWGVMR AVDPPITVPA WASMFTGKDP 
GELGIYGFRH MRRHSYDTYI VTSVDLREKY VWERRGLRSV VIGLPPGYPP RQYGIWISDF
LTPKGRPWTH PPQLAEEIGH YIFDIEYRTD RKEEAYRQLA EMTHARFRVA QKLLEKEWDV
FVLHEIGTDR AHHLFQKYWD PQHPKYAPDS PHADKIPTYY QLVDQLAGQL IKRLPPDTQI
LAISDHGNQA QRGVLAINQL LREWGLVEYE EKPGEDIEKV VNWRRTKAVA WGGYYARIYI
NTRDRPQGTV DPEEAEDIKK ELKKKLRTLK APWGYIENQI YEPRQLYRKA TGDYPDLVVY
LDEVRVRPVQ TIGHPDPWLP ENDRGPDDSL HSFNGFYAAT WGDAKKKDIH ALDVAQYIEA
LWSA