Gene Pisl_1505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1505 
Symbol 
ID4617134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1373272 
End bp1374546 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content64% 
IMG OID639784588 
ProductUDP-glucose 6-dehydrogenase 
Protein accessionYP_931004 
Protein GI119872997 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000902471 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.721727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCGC TCTCTGTTCT AGGGCTGGGC TACGTGGGGG TTGTCCACGC GGTGGGCTTC 
GCCCTGCTTG GCCACAGGGT GGTGGGGTAC GACGTGAATC CCTCTATCGT GGAGAGGCTG
AGGGCGGGGA GGCCCCACAT ATACGAGCCG GGGCTGGAGG AGGCGCTTGG GAGGGCTCTC
TCCAGCGGGA GGCTGTCTTT TGCGGAGTCG GCGGAGGAGG CCGTGGCCGC GACTGATGCG
ACGTTTATCG CCGTGGGGAC TCCGCCCGCC CCCGACGGCT CGGCCGACTT GCGGTATGTG
GAAGCCGCCG CTAGGGCCGT GGGGAGGGGG ATCAGGGCGA AGGGCCGTTG GCACCTCGTG
GTGGTTAAGT CGACTGTGCC GCCTGGGACG ACGGAGGGGC TTGTGGCTAG GGCTGTGGCT
GAGGAGGCGG GGGGCGTGAA GTTCTCGGTG GCGTCGAATC CGGAGTTTCT TAGGGAGGGG
TCGGCCCTGG AGGACTTCTT CAAGCCGGAT AGGATCGTCA TCGGCGCCGG CGACGAGAGG
GCGGCCTCCT TCCTGCTTGA CGTCTACAAG GCGGTGGATG CGCCTAAGCT CGTGATGAAG
CCGAGGGAGG CCGAGTTGGT TAAGTACGCC TCCAACGTCT TTCTGGCGTT GAAGATAAGC
TTTGCCAATG AGGTGGGGCT TTTGGCGAAG AGGCTGGGGG TCGACACATA TAGGGTGTTC
GAGGCCGTGG GCCTCGACAA GAGGATTGGG AGACACTACT TCGGGGCGGG GCTGGGCTTC
GGGGGGTCCT GCTTCCCTAA GGACACCCTG GCCTTCATCC GCTTTGGGGA GTCTCTCGGC
CTTGAGATGG CTATCTCCAA GGCCGTCCTT AGGGTTAACG AGTATATGCC GAGGTACGCC
GTGCAGCTCC TCGAGGAGAG ACTCGGGGGG CTGAGGGGGA GGCACGTGGG GGTTCTGGGC
CTCGCGTTTA AGCCCAATAC AGACGACGTG CGGGAGTCTA GGGGGGTGGA GGTGGCGAGG
CTCCTCCTGG AGAGGGGGGC GAGGGTCTAC GTCCACGACC CGATGGCTAT GGAGAAGGCG
CGGGCCGTCT TGGGGGACTC GGTGACGTAT GTGGAGGACC CCCAGGCCCT CCTCGACCAA
GTGGAGGGGG TGATAATCGC CACAGCCTGG CCGCAGTACG AGGGCCTCGA CTACCGGGGC
AAGGTGGTGG TAGACGGCAG ATACGTAAAG AAGGCCAGAG AGGCAAAGAT ATACGAAGGC
GTGGCGTGGG CTTAG
 
Protein sequence
MASLSVLGLG YVGVVHAVGF ALLGHRVVGY DVNPSIVERL RAGRPHIYEP GLEEALGRAL 
SSGRLSFAES AEEAVAATDA TFIAVGTPPA PDGSADLRYV EAAARAVGRG IRAKGRWHLV
VVKSTVPPGT TEGLVARAVA EEAGGVKFSV ASNPEFLREG SALEDFFKPD RIVIGAGDER
AASFLLDVYK AVDAPKLVMK PREAELVKYA SNVFLALKIS FANEVGLLAK RLGVDTYRVF
EAVGLDKRIG RHYFGAGLGF GGSCFPKDTL AFIRFGESLG LEMAISKAVL RVNEYMPRYA
VQLLEERLGG LRGRHVGVLG LAFKPNTDDV RESRGVEVAR LLLERGARVY VHDPMAMEKA
RAVLGDSVTY VEDPQALLDQ VEGVIIATAW PQYEGLDYRG KVVVDGRYVK KAREAKIYEG
VAWA