Gene Pisl_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1460 
Symbol 
ID4616645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1330998 
End bp1331420 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content55% 
IMG OID639784543 
Productsyntaxin domain-containing protein 
Protein accessionYP_930959 
Protein GI119872952 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.681361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCAGG AGGCTCTCAG AATTGCCGTG GACAAGGTGG TGGAGAAGCT TAGGGAGGGC 
AAAAAGCTCA CCACGGAGGA CATCTTCCTC CTATACCTCG GCACCATAGT AAACGAGCTA
GGCGGCATAA GAGGCGAGAT CGCGCGGCTA GAGCAGAGGA TAGACCAGAT AAGCCAGAGG
ATTGACGCCA CAAACCAGAG GATTGACGCG CTGGCAGACA GCCTAAACAA GAGGATAGAC
ACGGTGGCGG AGAGCCTAAA CAGGAGAATC GACGCAGTGG CAGACAGCCT AGGTAAAAGA
ATTGATGAGA CAAACAAGCG GATTGACGCA CTCAGCGCTC GTATAGACGA CGTGCAGAAG
ACTCTGCTGG AGATACAGCG CCTCTTGATG GAGCTGCTGA AGACCGGCAC CGGCCGTTCT
TGA
 
Protein sequence
MAQEALRIAV DKVVEKLREG KKLTTEDIFL LYLGTIVNEL GGIRGEIARL EQRIDQISQR 
IDATNQRIDA LADSLNKRID TVAESLNRRI DAVADSLGKR IDETNKRIDA LSARIDDVQK
TLLEIQRLLM ELLKTGTGRS