Gene Pisl_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1401 
Symbol 
ID4618128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1269561 
End bp1270643 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content52% 
IMG OID639784487 
ProductAAA ATPase 
Protein accessionYP_930903 
Protein GI119872896 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTTA GGGGAGTCAC GCTTATCTAT GGGCCGCCTG GCGCTGGAAA GACTACCTTT 
GCCGCATGGT ATACCTATAA CAATTATGAT AAAATTTTTT GGGTCTCTGC CTTTGAAGAT
GAGAGAACCT TTAGGAGGAA TATGGCGGCT TTGGGCTACA ACTTCGGCGA GAAGCTCGTC
TACTGGGAGG CGGTGTTGGC CGGCGCGGAG GCGTTTTTCA ACACCCTGTT AGACGCAGTA
GTTCGCGAAA AGCCGCAGGC CCTGGTAATA GACTCCGTGA CGGAGTTTCT CGCCATGGGA
GGGGGGTTGG ACATCCTCCA CAATGTTATT TACAGAGCTA TAAAACAGGG AGGGGTCGAC
GTCTTTCTGA CGGCGGAGAG GGAGGTTGCG CCAAAGGTGG CTTATGTGGC GGACAACGTC
ATTGAGCTGG CCTACGAGGT CTACCCCTAC GGCGCCGTGA GAGAGGCCGT CGTGAGGAAG
ATACGCGGGG GGAAGGCGGG TTACACGTTA CCCTTTGTAA TTAGAGAAGG CACTGGCATA
CTCTTTGTAA CGCCGACAGA GGCAGCAGAG GCGCGTGTAA TGCGGATAGA GACTGGGACG
TGTCTCGACG TAGCTGTCGG CGGGCTTTAC AAGGGGCTGT TACATGTCCT TGTGGGACCG
CCTGGGGCTG GAAAAACTTG GCTTATGTTG AAGGCTGTTA AATCTCTACG AGAGCGGGGT
GTAAAAGCAG AGTATATAAG CGTAACTGGG GGCGGCTTCG TGTATGTTCA ACAATTTGGT
GTAGAATCCA TAGACGTAAA TCTAGACTTA GGCGAGTTAT ACGCTGCGTT AGCTACAGTT
AAGGCAGACG TCGTTTTTAT CAGAGGCTTA GAAGCTCTTT TTAGATTATA TGGCGAACAA
CTACTGTACT CCACCCTACA GACGTTACTG AGGGTAGCCA GGTCGGGCCC CGCCGTAGTT
ATATCACTTA GAGATTTACA CGATCTCGAC GTGCTTTTCG ACGTGATTGT AAACGTAGAG
AATAGGACAG TCACAGGCGT GAGGGCGCCG GGCGGGAAGA TAGGGGAGAA GGTCAAGTGT
TGA
 
Protein sequence
MMLRGVTLIY GPPGAGKTTF AAWYTYNNYD KIFWVSAFED ERTFRRNMAA LGYNFGEKLV 
YWEAVLAGAE AFFNTLLDAV VREKPQALVI DSVTEFLAMG GGLDILHNVI YRAIKQGGVD
VFLTAEREVA PKVAYVADNV IELAYEVYPY GAVREAVVRK IRGGKAGYTL PFVIREGTGI
LFVTPTEAAE ARVMRIETGT CLDVAVGGLY KGLLHVLVGP PGAGKTWLML KAVKSLRERG
VKAEYISVTG GGFVYVQQFG VESIDVNLDL GELYAALATV KADVVFIRGL EALFRLYGEQ
LLYSTLQTLL RVARSGPAVV ISLRDLHDLD VLFDVIVNVE NRTVTGVRAP GGKIGEKVKC