Gene Pisl_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1370 
Symbol 
ID4616338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1244616 
End bp1245299 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content60% 
IMG OID639784458 
Productcobalamin-5-phosphate synthase CobS 
Protein accessionYP_930875 
Protein GI119872868 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0368] Cobalamin-5-phosphate synthase 
TIGRFAM ID[TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.696101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTGTC TCAAGGCGGT AGTGGCCTTC TTTACCGCCC TCCCAGTCGG CGGGGCCGAG 
CTGGACTTCT CCTGTATTTG GGCCACCCCC TATCTGGCGG GGCTAATGGT GGGGGGCGCC
GGGGGAGCCG TCTACTTCCT CACCCACAGC CCTGCGGCCG CCTACGCCGC TCTCCTCTTG
GCCACCGGTC TCCACCACCT GGACGGCCTT GCTGACGTGG GAGATGCGCT GATGGTGAGG
GATAGAGAGA GGGCGCGGCG GGTGTTGGAG GATCCTAGGA GGGGCGTTGG CGGGATATTC
GCCGTGGTAG CCCTCTTTGT GCTTGCGGCC AGCGCGAGAC CAGAGAGCTG GCTTGACTAC
ATAGTAACTG ACCTCTATTC AAAAGCGTTG GCCCTCGTCG TAGCTGCCTA CTCAAAGCCG
TTTAAGGAGG GGCTCGGTTC TCTTTTCATC GTCTCTGCAA AACGCCAATG GCCAGCCGCC
CTACCAGCTC TCGCTGTTGC TGCTTGGCTC CACCCAGCGG CCTTTCTTGC CGCAACAGTA
CTTTCGCTAT TCTTCTATGT AGCCGCTTAC AAACATTTGG GTGGTGCAAA CGGCGACCTT
CTAGGCGCTC TGCTGGAGGT CACAAGGGCG CTCTATCTGG CAACAGTTGA CCTTAGCACA
TCCCTTATAA ATGGGCTCTT CTAA
 
Protein sequence
MRCLKAVVAF FTALPVGGAE LDFSCIWATP YLAGLMVGGA GGAVYFLTHS PAAAYAALLL 
ATGLHHLDGL ADVGDALMVR DRERARRVLE DPRRGVGGIF AVVALFVLAA SARPESWLDY
IVTDLYSKAL ALVVAAYSKP FKEGLGSLFI VSAKRQWPAA LPALAVAAWL HPAAFLAATV
LSLFFYVAAY KHLGGANGDL LGALLEVTRA LYLATVDLST SLINGLF