| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1280 |
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| Symbol | |
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| ID | 4617461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 1162683 |
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| End bp | 1163450 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639784370 |
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| Product | tRNA pseudouridine synthase ACD |
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| Protein accession | YP_930787 |
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| Protein GI | 119872780 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.528542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTTATT TATACCGTAT CGCTTACGAC GGAACGTTGT TTTATGGATT TACCGGACAC
TCGCGATCTC TCGAGCCAGC CTTAAAAAGG GTTTTTGGCG AGATCCTTGG CCGAGGCAGT
AGGACAGACC CAGGCGTTTC AGCTGTGGCA AATACGGTGA TGGTCTCCCA GAAGTTGCCA
ATAGCTCTTG TAAATTCGAA GTTGCCGCGG GGGGTCTGGG CATGGGCTAT AGCAGAAGTG
CCACAGAGTT TTAACCCTAG ACGCGCTAAA TTTAGGCATT ATCTATATGT GGCGCCTCAT
TGGGGCGAGG ACTTAGGATC TATGCACGAG GCGGCAGAAG TCCTCGCCGG AACTCACGAC
TTTGCCTCAT TTATACAAAG GAGGGGAGAG AAGATTTCAA CCATTGCTAC AGTTATGGAG
ATCAAAGTAG AGCTAAGGGG GGATCTAATT TATATGCACT TCGTAGGGCG GGGTTTCAAA
AACAAGATGA TTAGAAAACT TGCATGGGCA ATATTAGCCG CTGGCCGCGG CATATTTAAT
ATACGTGATA TAAGAGAACT ATTGGAGAGA CCAAGGCCGG GCGTTGTGCC TAGTGCGCCA
GCCGAAGGCC TTGTCTTGCT TAATATAGAG TACGATGTTG ATTTCCAGAT AGATTATACT
GCTTTAAGAT CGGCATATGT GTATTTTCTC TCAAAGTATA GACATGCTGT AGCTCACGCA
GCGGCTTTAA AAGCTGTTGG AGAGACTTTG GCCACGTGGG AGCAGTGA
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| Protein sequence | MPYLYRIAYD GTLFYGFTGH SRSLEPALKR VFGEILGRGS RTDPGVSAVA NTVMVSQKLP
IALVNSKLPR GVWAWAIAEV PQSFNPRRAK FRHYLYVAPH WGEDLGSMHE AAEVLAGTHD
FASFIQRRGE KISTIATVME IKVELRGDLI YMHFVGRGFK NKMIRKLAWA ILAAGRGIFN
IRDIRELLER PRPGVVPSAP AEGLVLLNIE YDVDFQIDYT ALRSAYVYFL SKYRHAVAHA
AALKAVGETL ATWEQ
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