Gene Pisl_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1169 
Symbol 
ID4617814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1060145 
End bp1061257 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content51% 
IMG OID639784262 
ProductSufBD protein 
Protein accessionYP_930680 
Protein GI119872673 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.038096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.786569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTAA ACACTGCAAG GGCGCTTGGG TTAGAGCTCG CGGGTAAACT GCCGTGGCAA 
GAGATAGCAG ATTCGCCAAC TATTAGATAC TACACAGATT GGTCTAAGTT TGAGGGTTTT
AAACCGTTGA GAGACGTCAC GCCTCAGAAA CATCCGCCCG GCCCTTGCGA AATTGTTGTT
ATAAACGGCC GTTTGGCCGG CTGGGGCGTT TGCAACGGCG TAGAGACGGC CTTGGCGAAT
GACATATTTA GGCAAGTGGA GATAAATAGC AAGATTTTAG CTCTACACGC CTCTGCGCTT
TCAGAGGCTG TCTATGTGGG GGTGAAGAGC CGGGTGGAGC CTCTCGTAAT TAAATTAATT
GCAGATTTGC AAAGAGCCCA TGTTGCCAGC CATTTACTAC TTGACGTAGA CAAATCTGCG
TCAGGCTCTA TAGTGGTGTA TGTCGAAAGT GGTGTAGATA CAATGCATAC GGCGGTTGTA
GAGGGCGATG TGAGGGGGCC TGTTGAATAT GTCCTTGTTT CTAGAGGCGG CGGCCCCCAG
TATGTACACT CTACACTGTC TATTCGCTCT TCTATATATG GGAGGCCGTT TGTAGTAGGC
GGAGTTATGA ACGCCGTCAG AGAGGAGTAT ATACTTGGGG AGGAGACTTA CGCCGAGGTT
GTGGGGCTGG AGTTGGGGCT TGGCGAGAGT AGGATAGATC ACGTGGTTTC TCTCGTCAAC
AACGCGCCTA GGGGCCGGAG TTTTGCAAAA CTCTACGCAG TAGCCGCCGA CAGATCTTTT
GTCGCGCAAC GCGCGGTGGG CAGAATTACC CAGAGGGGGG TCGGCAGCGA GAGCTCTGTC
GACGGGGTGG CCTATATTGC AGGAGATGAG GCTGTGGTAA ATACACAACC TGTGATTTTG
GTGGAGACAG GCGATGTGGC AGGCGCTAGA CACTCAGCGG CTGACGCGGC GTTAGACGAG
GAGAAGGAGT TTTTCCTAAG GGCCCGCGGG ATAAAAAAAG AGGACATCTC TAGGTTGTTG
ATAGCTAGCC TTATAGATCA ATACCTCTCT ACGCTGTCTG ACAGGGCTCG AGATTTTGTA
AACTCTGTGT TTAAATCCGT CGGCATGTTT TAG
 
Protein sequence
MDLNTARALG LELAGKLPWQ EIADSPTIRY YTDWSKFEGF KPLRDVTPQK HPPGPCEIVV 
INGRLAGWGV CNGVETALAN DIFRQVEINS KILALHASAL SEAVYVGVKS RVEPLVIKLI
ADLQRAHVAS HLLLDVDKSA SGSIVVYVES GVDTMHTAVV EGDVRGPVEY VLVSRGGGPQ
YVHSTLSIRS SIYGRPFVVG GVMNAVREEY ILGEETYAEV VGLELGLGES RIDHVVSLVN
NAPRGRSFAK LYAVAADRSF VAQRAVGRIT QRGVGSESSV DGVAYIAGDE AVVNTQPVIL
VETGDVAGAR HSAADAALDE EKEFFLRARG IKKEDISRLL IASLIDQYLS TLSDRARDFV
NSVFKSVGMF