Gene Pisl_1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1150 
Symbol 
ID4617199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1039304 
End bp1040092 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content50% 
IMG OID639784246 
Productprephenate dehydratase 
Protein accessionYP_930664 
Protein GI119872657 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.713990000000001e-18 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCATATC TAGGGCCAGA ACGCTCGTTT ACTTGGGAAG CCGCCACGTC TCTATACCCA 
AATGGAGCGC ATGTCGCATA TAGAACTGTA ACAGAGGTTT TCAAAGCTGT AGAAAGCGGC
GTTGTAGACT ACGGGGTGGT CCCCTTTATA AACAGCCTCG AGGGGCCTGT GGGAGAGACT
GTAGACGCCT TGGCGACACA TGAGGTTAAA ATCTTGGCCA TGGGCGAGAT GAGGATAACT
CTCTGTCTAG CCAAGAGGGG CAACCCCCGT GTGGTATATA CACACCCCCA CGCCGCGGCG
CAGGCGAGAA AAATTCTCTC TGCATTAGGC GCCGACGTGG TTTATACATC ATCTACATCG
GAGGCAGTTA GAGAGTTTGA AAGATGTAGA GATTGCGCCG TGATAGCGTC GCCAAGAGCG
CTTGAGCAGT ACAGTGAAAA AATATGCGGA GTTGAAGACT GGGAGAGCTA TACCCGTTTC
GCAGTTTTAT CTAAAGAGAG TAGCCAAGCT GGAGCTAGGG CGGCGCTTAT ATTCGCCGTC
CCCAACGTGG CCGGGGCTCT CTACAAAGCG CTTGGCCCCA TAGCTAAGAG AGGCATAAAT
ATGACTTTGA TATATTCAAG GCCGACGAAG CTCTCTCCCT GGGACTACTT CTTTCTTGTA
GAAGTGGAGT CTAACGCTGA GCTAAACGCC GCACTTGACG AAATGAGACA ACACACCACA
ATGTTAAAGT TGGCAGGCCG CTATAATATA ATCAACTTGT CTCAACCAAT TGCCGAGCTT
GTTCAATAA
 
Protein sequence
MAYLGPERSF TWEAATSLYP NGAHVAYRTV TEVFKAVESG VVDYGVVPFI NSLEGPVGET 
VDALATHEVK ILAMGEMRIT LCLAKRGNPR VVYTHPHAAA QARKILSALG ADVVYTSSTS
EAVREFERCR DCAVIASPRA LEQYSEKICG VEDWESYTRF AVLSKESSQA GARAALIFAV
PNVAGALYKA LGPIAKRGIN MTLIYSRPTK LSPWDYFFLV EVESNAELNA ALDEMRQHTT
MLKLAGRYNI INLSQPIAEL VQ