Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1150 |
Symbol | |
ID | 4617199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1039304 |
End bp | 1040092 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639784246 |
Product | prephenate dehydratase |
Protein accession | YP_930664 |
Protein GI | 119872657 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 5.713990000000001e-18 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCATATC TAGGGCCAGA ACGCTCGTTT ACTTGGGAAG CCGCCACGTC TCTATACCCA AATGGAGCGC ATGTCGCATA TAGAACTGTA ACAGAGGTTT TCAAAGCTGT AGAAAGCGGC GTTGTAGACT ACGGGGTGGT CCCCTTTATA AACAGCCTCG AGGGGCCTGT GGGAGAGACT GTAGACGCCT TGGCGACACA TGAGGTTAAA ATCTTGGCCA TGGGCGAGAT GAGGATAACT CTCTGTCTAG CCAAGAGGGG CAACCCCCGT GTGGTATATA CACACCCCCA CGCCGCGGCG CAGGCGAGAA AAATTCTCTC TGCATTAGGC GCCGACGTGG TTTATACATC ATCTACATCG GAGGCAGTTA GAGAGTTTGA AAGATGTAGA GATTGCGCCG TGATAGCGTC GCCAAGAGCG CTTGAGCAGT ACAGTGAAAA AATATGCGGA GTTGAAGACT GGGAGAGCTA TACCCGTTTC GCAGTTTTAT CTAAAGAGAG TAGCCAAGCT GGAGCTAGGG CGGCGCTTAT ATTCGCCGTC CCCAACGTGG CCGGGGCTCT CTACAAAGCG CTTGGCCCCA TAGCTAAGAG AGGCATAAAT ATGACTTTGA TATATTCAAG GCCGACGAAG CTCTCTCCCT GGGACTACTT CTTTCTTGTA GAAGTGGAGT CTAACGCTGA GCTAAACGCC GCACTTGACG AAATGAGACA ACACACCACA ATGTTAAAGT TGGCAGGCCG CTATAATATA ATCAACTTGT CTCAACCAAT TGCCGAGCTT GTTCAATAA
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Protein sequence | MAYLGPERSF TWEAATSLYP NGAHVAYRTV TEVFKAVESG VVDYGVVPFI NSLEGPVGET VDALATHEVK ILAMGEMRIT LCLAKRGNPR VVYTHPHAAA QARKILSALG ADVVYTSSTS EAVREFERCR DCAVIASPRA LEQYSEKICG VEDWESYTRF AVLSKESSQA GARAALIFAV PNVAGALYKA LGPIAKRGIN MTLIYSRPTK LSPWDYFFLV EVESNAELNA ALDEMRQHTT MLKLAGRYNI INLSQPIAEL VQ
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