Gene Pisl_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1015 
Symbol 
ID4618198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp914394 
End bp915005 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content40% 
IMG OID639784112 
Producthydrolase 
Protein accessionYP_930532 
Protein GI119872525 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.772817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000000000927289 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATTACA TACTCAGCTT CTGGGGTCTT CTAGTCGATA GGTTAGACTT TTGGGAGATA 
TGGCGTAGCG TATTAGGCCG TAGCGATTTT GTAAACGAGA TATCTCATTT TGTAAATGAA
GTGAATATGG CCGGTTTTGA AATCCCCCTA AAGGCAGTCG CCCGTATATT TGCGTCTAAA
ACTGGCAAGA ATCCAACAGA ATTAACAAGG AGGTTTATAG AGAAGACAAT GTCGCAATTG
ACGCCGAAGC CTTGTGTTAT TGATTTCCTT AGATCGATAA AGGGAGATGG CAAAGTCGCT
ATTTTGTCAA ATACCCCGTG TAGATGTTTT ATAGAGCTGT TTCTCTCAAA ATGGAGTGTA
GAGGCGGATT TAGTTATTAC GTCAGACATA ATATTGAGAA GAAAACCGTC AAGAGCCGTC
TTTAAATACG CCCTGCGTAG GTTAGGCACA GAGCCTCATG AAGTTATATA TATAGGCGAT
AGCGAAGAAG ATCTAGGTGC AATGGGAGTA GGGCTTTTTA CAATAATTGT AGGATCATAC
GGAGGGCATG TCAACTTCCC CTCTTTATGC GAATTACAAA ATTGGCTTAT CGAAAATTTA
GGCAAAAATT AA
 
Protein sequence
MNYILSFWGL LVDRLDFWEI WRSVLGRSDF VNEISHFVNE VNMAGFEIPL KAVARIFASK 
TGKNPTELTR RFIEKTMSQL TPKPCVIDFL RSIKGDGKVA ILSNTPCRCF IELFLSKWSV
EADLVITSDI ILRRKPSRAV FKYALRRLGT EPHEVIYIGD SEEDLGAMGV GLFTIIVGSY
GGHVNFPSLC ELQNWLIENL GKN