Gene Pisl_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0889 
Symbol 
ID4617249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp795141 
End bp795857 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content46% 
IMG OID639783985 
Productnitroreductase 
Protein accessionYP_930408 
Protein GI119872401 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.351311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACTTTT TCGAAGTTGT CCAAAGGAGA AGATCAATTA GGAGGTTTAA GAGGGTTAAG 
ATACCAGAAG AAGACGTTGT AAAAATCATG GAGGCCGGTA GAGCCGCGCC TACCGATGCC
ACTCTCCACC TCTGGAGCGC CATAAGGGTA GTAGATGAGA CAAAGAGGGC CGAGATAGCC
CGTTTAATAG AGCAGCCACA TGTTGAGGAA GGTGCGGAAT TTTTCGTATT TCTAGCGGAT
CTATACCGCT TAGGGGAGCT TCTGAGGTAT CGAGGCAACG ACATAGTTGA ACATAGACTT
GCGTTGTTCG TCTTCGCCGC TATAGACGCT GCGTTAGCAG CTGAAAACAT GGCTTTAGCA
GCGACAGCGC TTGGATATGG CTCTTGTTTC ATCGGCGCTG TACAGAATGC ACCACGTGAG
CTTATAAAAA TTCTGAATTT ACCTAAACTC ACCTATCCTC TCTTTGGGCT TGTAATTGGC
GTTCCTGACG AATACCCACC ACCGCGGCCT CGTCTACCAC TAGACATGTT GTTTCACCTA
AATGAATACA GGAGATATAC AGAGGCAGAG TTAAAAAATG CTTTTACAGA GATGTCAAGA
GTCTCAAAGA GCGGCAATTG GCTAAGACTA TTGATTAAAT ATGCAGGGAG AGGCGGATAT
TTCGATAGCC GTGGTACAAC ATTAGAAACG CTTCTTAAAG AACTTGACTT TATCTGA
 
Protein sequence
MDFFEVVQRR RSIRRFKRVK IPEEDVVKIM EAGRAAPTDA TLHLWSAIRV VDETKRAEIA 
RLIEQPHVEE GAEFFVFLAD LYRLGELLRY RGNDIVEHRL ALFVFAAIDA ALAAENMALA
ATALGYGSCF IGAVQNAPRE LIKILNLPKL TYPLFGLVIG VPDEYPPPRP RLPLDMLFHL
NEYRRYTEAE LKNAFTEMSR VSKSGNWLRL LIKYAGRGGY FDSRGTTLET LLKELDFI