Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0889 |
Symbol | |
ID | 4617249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 795141 |
End bp | 795857 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639783985 |
Product | nitroreductase |
Protein accession | YP_930408 |
Protein GI | 119872401 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.351311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACTTTT TCGAAGTTGT CCAAAGGAGA AGATCAATTA GGAGGTTTAA GAGGGTTAAG ATACCAGAAG AAGACGTTGT AAAAATCATG GAGGCCGGTA GAGCCGCGCC TACCGATGCC ACTCTCCACC TCTGGAGCGC CATAAGGGTA GTAGATGAGA CAAAGAGGGC CGAGATAGCC CGTTTAATAG AGCAGCCACA TGTTGAGGAA GGTGCGGAAT TTTTCGTATT TCTAGCGGAT CTATACCGCT TAGGGGAGCT TCTGAGGTAT CGAGGCAACG ACATAGTTGA ACATAGACTT GCGTTGTTCG TCTTCGCCGC TATAGACGCT GCGTTAGCAG CTGAAAACAT GGCTTTAGCA GCGACAGCGC TTGGATATGG CTCTTGTTTC ATCGGCGCTG TACAGAATGC ACCACGTGAG CTTATAAAAA TTCTGAATTT ACCTAAACTC ACCTATCCTC TCTTTGGGCT TGTAATTGGC GTTCCTGACG AATACCCACC ACCGCGGCCT CGTCTACCAC TAGACATGTT GTTTCACCTA AATGAATACA GGAGATATAC AGAGGCAGAG TTAAAAAATG CTTTTACAGA GATGTCAAGA GTCTCAAAGA GCGGCAATTG GCTAAGACTA TTGATTAAAT ATGCAGGGAG AGGCGGATAT TTCGATAGCC GTGGTACAAC ATTAGAAACG CTTCTTAAAG AACTTGACTT TATCTGA
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Protein sequence | MDFFEVVQRR RSIRRFKRVK IPEEDVVKIM EAGRAAPTDA TLHLWSAIRV VDETKRAEIA RLIEQPHVEE GAEFFVFLAD LYRLGELLRY RGNDIVEHRL ALFVFAAIDA ALAAENMALA ATALGYGSCF IGAVQNAPRE LIKILNLPKL TYPLFGLVIG VPDEYPPPRP RLPLDMLFHL NEYRRYTEAE LKNAFTEMSR VSKSGNWLRL LIKYAGRGGY FDSRGTTLET LLKELDFI
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